Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Odf4Q8VI88 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Odf4Q8VI88 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Odf4Q8VI88 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.05■□□□□ 0.8
Odf4Q8VI88 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Odf4Q8VI88 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Odf4Q8VI88 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Odf4Q8VI88 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Odf4Q8VI88 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.05■□□□□ 0.8
Odf4Q8VI88 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Odf4Q8VI88 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Odf4Q8VI88 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Odf4Q8VI88 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.04■□□□□ 0.8
Odf4Q8VI88 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Odf4Q8VI88 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Odf4Q8VI88 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Odf4Q8VI88 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Odf4Q8VI88 Gm11175-201ENSMUST00000116172 543 ntBASIC20.03■□□□□ 0.8
Odf4Q8VI88 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Odf4Q8VI88 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Odf4Q8VI88 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Odf4Q8VI88 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Odf4Q8VI88 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.03■□□□□ 0.8
Odf4Q8VI88 Mir6538-201ENSMUST00000183713 110 ntBASIC20.02■□□□□ 0.8
Odf4Q8VI88 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Odf4Q8VI88 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.02■□□□□ 0.79
Odf4Q8VI88 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Odf4Q8VI88 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Odf4Q8VI88 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.01■□□□□ 0.79
Odf4Q8VI88 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Odf4Q8VI88 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Odf4Q8VI88 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Odf4Q8VI88 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Odf4Q8VI88 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.99■□□□□ 0.79
Odf4Q8VI88 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Odf4Q8VI88 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Odf4Q8VI88 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Odf4Q8VI88 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Odf4Q8VI88 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Odf4Q8VI88 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Odf4Q8VI88 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Odf4Q8VI88 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.98■□□□□ 0.79
Odf4Q8VI88 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Odf4Q8VI88 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Odf4Q8VI88 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Odf4Q8VI88 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Odf4Q8VI88 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Odf4Q8VI88 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Odf4Q8VI88 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.97■□□□□ 0.79
Odf4Q8VI88 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Odf4Q8VI88 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Odf4Q8VI88 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.96■□□□□ 0.79
Odf4Q8VI88 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Odf4Q8VI88 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Odf4Q8VI88 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Odf4Q8VI88 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.95■□□□□ 0.78
Odf4Q8VI88 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Odf4Q8VI88 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Odf4Q8VI88 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Odf4Q8VI88 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Odf4Q8VI88 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Odf4Q8VI88 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Odf4Q8VI88 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Odf4Q8VI88 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Odf4Q8VI88 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Odf4Q8VI88 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Odf4Q8VI88 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Odf4Q8VI88 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Odf4Q8VI88 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Odf4Q8VI88 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Odf4Q8VI88 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Odf4Q8VI88 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Odf4Q8VI88 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.9■□□□□ 0.78
Odf4Q8VI88 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Odf4Q8VI88 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Odf4Q8VI88 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Odf4Q8VI88 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Odf4Q8VI88 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Odf4Q8VI88 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Odf4Q8VI88 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Odf4Q8VI88 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.88■□□□□ 0.77
Odf4Q8VI88 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Odf4Q8VI88 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Odf4Q8VI88 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Odf4Q8VI88 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.87■□□□□ 0.77
Odf4Q8VI88 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Odf4Q8VI88 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Odf4Q8VI88 Gm4799-201ENSMUST00000095396 657 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms