Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sft2d2Q8VD57 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sft2d2Q8VD57 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sft2d2Q8VD57 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sft2d2Q8VD57 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sft2d2Q8VD57 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sft2d2Q8VD57 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sft2d2Q8VD57 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sft2d2Q8VD57 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sft2d2Q8VD57 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sft2d2Q8VD57 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Sft2d2Q8VD57 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sft2d2Q8VD57 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sft2d2Q8VD57 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sft2d2Q8VD57 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sft2d2Q8VD57 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Sft2d2Q8VD57 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sft2d2Q8VD57 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sft2d2Q8VD57 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sft2d2Q8VD57 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sft2d2Q8VD57 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sft2d2Q8VD57 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sft2d2Q8VD57 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sft2d2Q8VD57 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sft2d2Q8VD57 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Sft2d2Q8VD57 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sft2d2Q8VD57 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sft2d2Q8VD57 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sft2d2Q8VD57 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sft2d2Q8VD57 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sft2d2Q8VD57 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.35■□□□□ 0.53
Sft2d2Q8VD57 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sft2d2Q8VD57 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sft2d2Q8VD57 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sft2d2Q8VD57 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sft2d2Q8VD57 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sft2d2Q8VD57 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sft2d2Q8VD57 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sft2d2Q8VD57 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sft2d2Q8VD57 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.33■□□□□ 0.53
Sft2d2Q8VD57 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.33■□□□□ 0.53
Sft2d2Q8VD57 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sft2d2Q8VD57 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sft2d2Q8VD57 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sft2d2Q8VD57 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sft2d2Q8VD57 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sft2d2Q8VD57 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sft2d2Q8VD57 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sft2d2Q8VD57 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.32■□□□□ 0.52
Sft2d2Q8VD57 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sft2d2Q8VD57 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sft2d2Q8VD57 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.31■□□□□ 0.52
Sft2d2Q8VD57 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.31■□□□□ 0.52
Sft2d2Q8VD57 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sft2d2Q8VD57 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sft2d2Q8VD57 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sft2d2Q8VD57 Particl-201ENSMUST00000205370 1560 ntBASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sft2d2Q8VD57 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Sft2d2Q8VD57 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sft2d2Q8VD57 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sft2d2Q8VD57 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.29■□□□□ 0.52
Sft2d2Q8VD57 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sft2d2Q8VD57 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sft2d2Q8VD57 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sft2d2Q8VD57 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sft2d2Q8VD57 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sft2d2Q8VD57 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Sft2d2Q8VD57 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sft2d2Q8VD57 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sft2d2Q8VD57 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sft2d2Q8VD57 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sft2d2Q8VD57 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Sft2d2Q8VD57 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.26■□□□□ 0.51
Sft2d2Q8VD57 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sft2d2Q8VD57 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sft2d2Q8VD57 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sft2d2Q8VD57 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sft2d2Q8VD57 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms