Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Lsm1Q8VC85 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lsm1Q8VC85 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Lsm1Q8VC85 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Lsm1Q8VC85 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.77■■□□□ 1.08
Lsm1Q8VC85 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Lsm1Q8VC85 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm1Q8VC85 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm1Q8VC85 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm1Q8VC85 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.76■■□□□ 1.07
Lsm1Q8VC85 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm1Q8VC85 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.76■■□□□ 1.07
Lsm1Q8VC85 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm1Q8VC85 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm1Q8VC85 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lsm1Q8VC85 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC21.75■■□□□ 1.07
Lsm1Q8VC85 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm1Q8VC85 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm1Q8VC85 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm1Q8VC85 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm1Q8VC85 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Lsm1Q8VC85 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lsm1Q8VC85 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm1Q8VC85 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm1Q8VC85 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm1Q8VC85 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lsm1Q8VC85 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm1Q8VC85 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Lsm1Q8VC85 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm1Q8VC85 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm1Q8VC85 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm1Q8VC85 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.72■■□□□ 1.07
Lsm1Q8VC85 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
Lsm1Q8VC85 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lsm1Q8VC85 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Lsm1Q8VC85 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lsm1Q8VC85 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm1Q8VC85 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm1Q8VC85 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm1Q8VC85 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
Lsm1Q8VC85 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lsm1Q8VC85 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Lsm1Q8VC85 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.69■■□□□ 1.06
Lsm1Q8VC85 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm1Q8VC85 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm1Q8VC85 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lsm1Q8VC85 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Lsm1Q8VC85 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm1Q8VC85 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm1Q8VC85 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lsm1Q8VC85 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm1Q8VC85 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm1Q8VC85 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm1Q8VC85 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.67■■□□□ 1.06
Lsm1Q8VC85 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm1Q8VC85 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lsm1Q8VC85 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm1Q8VC85 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm1Q8VC85 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm1Q8VC85 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Lsm1Q8VC85 Gm8503-201ENSMUST00000118131 455 ntBASIC21.66■■□□□ 1.06
Lsm1Q8VC85 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm1Q8VC85 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Lsm1Q8VC85 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm1Q8VC85 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm1Q8VC85 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm1Q8VC85 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm1Q8VC85 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lsm1Q8VC85 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lsm1Q8VC85 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lsm1Q8VC85 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Lsm1Q8VC85 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Lsm1Q8VC85 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Lsm1Q8VC85 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Lsm1Q8VC85 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.64■■□□□ 1.05
Lsm1Q8VC85 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm1Q8VC85 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lsm1Q8VC85 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm1Q8VC85 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lsm1Q8VC85 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm1Q8VC85 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm1Q8VC85 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.62■■□□□ 1.05
Lsm1Q8VC85 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm1Q8VC85 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lsm1Q8VC85 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Lsm1Q8VC85 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.61■■□□□ 1.05
Lsm1Q8VC85 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lsm1Q8VC85 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lsm1Q8VC85 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
Lsm1Q8VC85 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.6■■□□□ 1.05
Lsm1Q8VC85 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lsm1Q8VC85 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.59■■□□□ 1.05
Lsm1Q8VC85 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lsm1Q8VC85 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Lsm1Q8VC85 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lsm1Q8VC85 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lsm1Q8VC85 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lsm1Q8VC85 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Lsm1Q8VC85 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Lsm1Q8VC85 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms