Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Atp2a1Q8R429 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Atp2a1Q8R429 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.55■■□□□ 1.68
Atp2a1Q8R429 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC25.55■■□□□ 1.68
Atp2a1Q8R429 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Atp2a1Q8R429 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Atp2a1Q8R429 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atp2a1Q8R429 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Atp2a1Q8R429 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.54■■□□□ 1.68
Atp2a1Q8R429 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Atp2a1Q8R429 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
Atp2a1Q8R429 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Atp2a1Q8R429 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.51■■□□□ 1.67
Atp2a1Q8R429 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Atp2a1Q8R429 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Atp2a1Q8R429 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Atp2a1Q8R429 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Atp2a1Q8R429 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.5■■□□□ 1.67
Atp2a1Q8R429 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Atp2a1Q8R429 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Atp2a1Q8R429 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Atp2a1Q8R429 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Atp2a1Q8R429 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Atp2a1Q8R429 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Atp2a1Q8R429 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Atp2a1Q8R429 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Atp2a1Q8R429 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Atp2a1Q8R429 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Atp2a1Q8R429 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC25.48■■□□□ 1.67
Atp2a1Q8R429 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Atp2a1Q8R429 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25.47■■□□□ 1.67
Atp2a1Q8R429 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atp2a1Q8R429 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atp2a1Q8R429 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Atp2a1Q8R429 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atp2a1Q8R429 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.46■■□□□ 1.67
Atp2a1Q8R429 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Atp2a1Q8R429 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Atp2a1Q8R429 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Atp2a1Q8R429 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Atp2a1Q8R429 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC25.45■■□□□ 1.66
Atp2a1Q8R429 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC25.45■■□□□ 1.66
Atp2a1Q8R429 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Atp2a1Q8R429 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Atp2a1Q8R429 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.44■■□□□ 1.66
Atp2a1Q8R429 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Atp2a1Q8R429 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Atp2a1Q8R429 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Atp2a1Q8R429 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.43■■□□□ 1.66
Atp2a1Q8R429 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Atp2a1Q8R429 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Atp2a1Q8R429 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Atp2a1Q8R429 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Atp2a1Q8R429 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.41■■□□□ 1.66
Atp2a1Q8R429 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
Atp2a1Q8R429 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Atp2a1Q8R429 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Atp2a1Q8R429 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Atp2a1Q8R429 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.39■■□□□ 1.66
Atp2a1Q8R429 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Atp2a1Q8R429 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Atp2a1Q8R429 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
Atp2a1Q8R429 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Atp2a1Q8R429 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Atp2a1Q8R429 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC25.38■■□□□ 1.65
Atp2a1Q8R429 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Atp2a1Q8R429 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
Atp2a1Q8R429 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.37■■□□□ 1.65
Atp2a1Q8R429 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Atp2a1Q8R429 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Atp2a1Q8R429 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Atp2a1Q8R429 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Atp2a1Q8R429 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Atp2a1Q8R429 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.36■■□□□ 1.65
Atp2a1Q8R429 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Atp2a1Q8R429 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.36■■□□□ 1.65
Atp2a1Q8R429 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Atp2a1Q8R429 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Atp2a1Q8R429 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Atp2a1Q8R429 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Atp2a1Q8R429 Gm10420-201ENSMUST00000121713 882 ntBASIC25.35■■□□□ 1.65
Atp2a1Q8R429 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.35■■□□□ 1.65
Atp2a1Q8R429 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Atp2a1Q8R429 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Atp2a1Q8R429 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.34■■□□□ 1.65
Atp2a1Q8R429 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Atp2a1Q8R429 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Atp2a1Q8R429 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
Atp2a1Q8R429 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
Atp2a1Q8R429 Gm44428-201ENSMUST00000204474 874 ntBASIC25.33■■□□□ 1.65
Atp2a1Q8R429 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.32■■□□□ 1.64
Atp2a1Q8R429 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Atp2a1Q8R429 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Atp2a1Q8R429 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.31■■□□□ 1.64
Atp2a1Q8R429 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Atp2a1Q8R429 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Atp2a1Q8R429 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Atp2a1Q8R429 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Atp2a1Q8R429 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
Atp2a1Q8R429 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.29■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms