Protein–RNA interactions for Protein: Q8R420

Abca3, ATP-binding cassette sub-family A member 3, mousemouse

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca3Q8R420 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29,53■■■□□ 2,32
Abca3Q8R420 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC29,53■■■□□ 2,32
Abca3Q8R420 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Abca3Q8R420 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29,53■■■□□ 2,32
Abca3Q8R420 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC29,53■■■□□ 2,32
Abca3Q8R420 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
Abca3Q8R420 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC29,52■■■□□ 2,32
Abca3Q8R420 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29,52■■■□□ 2,32
Abca3Q8R420 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29,51■■■□□ 2,32
Abca3Q8R420 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC29,51■■■□□ 2,31
Abca3Q8R420 Gm13238-201ENSMUST00000117655 780 ntBASIC29,5■■■□□ 2,31
Abca3Q8R420 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC29,5■■■□□ 2,31
Abca3Q8R420 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC29,5■■■□□ 2,31
Abca3Q8R420 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Abca3Q8R420 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC29,49■■■□□ 2,31
Abca3Q8R420 AC093043.1-201ENSMUST00000226700 898 ntBASIC29,48■■■□□ 2,31
Abca3Q8R420 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC29,48■■■□□ 2,31
Abca3Q8R420 Gm15820-201ENSMUST00000201566 728 ntBASIC29,47■■■□□ 2,31
Abca3Q8R420 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC29,47■■■□□ 2,31
Abca3Q8R420 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29,47■■■□□ 2,31
Abca3Q8R420 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC29,47■■■□□ 2,31
Abca3Q8R420 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC29,46■■■□□ 2,31
Abca3Q8R420 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC29,46■■■□□ 2,31
Abca3Q8R420 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,31
Abca3Q8R420 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC29,45■■■□□ 2,31
Abca3Q8R420 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29,45■■■□□ 2,3
Abca3Q8R420 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,3
Abca3Q8R420 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC29,45■■■□□ 2,3
Abca3Q8R420 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC29,45■■■□□ 2,3
Abca3Q8R420 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC29,44■■■□□ 2,3
Abca3Q8R420 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC29,43■■■□□ 2,3
Abca3Q8R420 Gm44428-201ENSMUST00000204474 874 ntBASIC29,43■■■□□ 2,3
Abca3Q8R420 Gm45444-201ENSMUST00000211394 898 ntBASIC29,43■■■□□ 2,3
Abca3Q8R420 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC29,42■■■□□ 2,3
Abca3Q8R420 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29,42■■■□□ 2,3
Abca3Q8R420 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC29,42■■■□□ 2,3
Abca3Q8R420 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Abca3Q8R420 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC29,41■■■□□ 2,3
Abca3Q8R420 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Abca3Q8R420 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29,41■■■□□ 2,3
Abca3Q8R420 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC29,4■■■□□ 2,3
Abca3Q8R420 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC29,4■■■□□ 2,3
Abca3Q8R420 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29,39■■■□□ 2,3
Abca3Q8R420 Gm43592-201ENSMUST00000196922 1165 ntBASIC29,38■■■□□ 2,29
Abca3Q8R420 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC29,38■■■□□ 2,29
Abca3Q8R420 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC29,38■■■□□ 2,29
Abca3Q8R420 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC29,37■■■□□ 2,29
Abca3Q8R420 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC29,37■■■□□ 2,29
Abca3Q8R420 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC29,36■■■□□ 2,29
Abca3Q8R420 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC29,36■■■□□ 2,29
Abca3Q8R420 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC29,36■■■□□ 2,29
Abca3Q8R420 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC29,36■■■□□ 2,29
Abca3Q8R420 Gm14117-201ENSMUST00000122417 843 ntBASIC29,35■■■□□ 2,29
Abca3Q8R420 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC29,35■■■□□ 2,29
Abca3Q8R420 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC29,35■■■□□ 2,29
Abca3Q8R420 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29,34■■■□□ 2,29
Abca3Q8R420 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC29,34■■■□□ 2,29
Abca3Q8R420 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29,33■■■□□ 2,29
Abca3Q8R420 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC29,33■■■□□ 2,29
Abca3Q8R420 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC29,32■■■□□ 2,28
Abca3Q8R420 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC29,31■■■□□ 2,28
Abca3Q8R420 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC29,31■■■□□ 2,28
Abca3Q8R420 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29,31■■■□□ 2,28
Abca3Q8R420 Rps24-207ENSMUST00000224568 714 ntBASIC29,31■■■□□ 2,28
Abca3Q8R420 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC29,29■■■□□ 2,28
Abca3Q8R420 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC29,29■■■□□ 2,28
Abca3Q8R420 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC29,28■■■□□ 2,28
Abca3Q8R420 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC29,27■■■□□ 2,28
Abca3Q8R420 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC29,26■■■□□ 2,27
Abca3Q8R420 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC29,25■■■□□ 2,27
Abca3Q8R420 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC29,25■■■□□ 2,27
Abca3Q8R420 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Abca3Q8R420 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Abca3Q8R420 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Abca3Q8R420 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC29,23■■■□□ 2,27
Abca3Q8R420 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC29,23■■■□□ 2,27
Abca3Q8R420 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC29,23■■■□□ 2,27
Abca3Q8R420 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29,23■■■□□ 2,27
Abca3Q8R420 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC29,22■■■□□ 2,27
Abca3Q8R420 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC29,22■■■□□ 2,27
Abca3Q8R420 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC29,22■■■□□ 2,27
Abca3Q8R420 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC29,22■■■□□ 2,27
Abca3Q8R420 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC29,2■■■□□ 2,27
Abca3Q8R420 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC29,2■■■□□ 2,27
Abca3Q8R420 Gm37847-201ENSMUST00000192163 1497 ntBASIC29,2■■■□□ 2,26
Abca3Q8R420 Gm31748-201ENSMUST00000194938 1497 ntBASIC29,2■■■□□ 2,26
Abca3Q8R420 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC29,19■■■□□ 2,26
Abca3Q8R420 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC29,19■■■□□ 2,26
Abca3Q8R420 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC29,19■■■□□ 2,26
Abca3Q8R420 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Abca3Q8R420 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29,18■■■□□ 2,26
Abca3Q8R420 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC29,18■■■□□ 2,26
Abca3Q8R420 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC29,18■■■□□ 2,26
Abca3Q8R420 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC29,17■■■□□ 2,26
Abca3Q8R420 Amer2-203ENSMUST00000225247 2662 ntBASIC29,17■■■□□ 2,26
Abca3Q8R420 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC29,17■■■□□ 2,26
Abca3Q8R420 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Abca3Q8R420 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Abca3Q8R420 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC29,17■■■□□ 2,26
Abca3Q8R420 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC29,17■■■□□ 2,26
Retrieved 100 of 76,532 protein–RNA pairs in 13,4 ms