Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Alms1Q8K4E0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Alms1Q8K4E0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Alms1Q8K4E0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Alms1Q8K4E0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Alms1Q8K4E0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Alms1Q8K4E0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Alms1Q8K4E0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.56■■□□□ 1.2
Alms1Q8K4E0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Alms1Q8K4E0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Alms1Q8K4E0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.55■■□□□ 1.2
Alms1Q8K4E0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Alms1Q8K4E0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.55■■□□□ 1.2
Alms1Q8K4E0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Alms1Q8K4E0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Alms1Q8K4E0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Alms1Q8K4E0 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.54■■□□□ 1.2
Alms1Q8K4E0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Alms1Q8K4E0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.54■■□□□ 1.2
Alms1Q8K4E0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.53■■□□□ 1.2
Alms1Q8K4E0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Alms1Q8K4E0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Alms1Q8K4E0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alms1Q8K4E0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Alms1Q8K4E0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.51■■□□□ 1.19
Alms1Q8K4E0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Alms1Q8K4E0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Alms1Q8K4E0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Alms1Q8K4E0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Alms1Q8K4E0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Alms1Q8K4E0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Alms1Q8K4E0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Alms1Q8K4E0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Alms1Q8K4E0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Alms1Q8K4E0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Alms1Q8K4E0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Alms1Q8K4E0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC22.48■■□□□ 1.19
Alms1Q8K4E0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Alms1Q8K4E0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Alms1Q8K4E0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
Alms1Q8K4E0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.48■■□□□ 1.19
Alms1Q8K4E0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.48■■□□□ 1.19
Alms1Q8K4E0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Alms1Q8K4E0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.47■■□□□ 1.19
Alms1Q8K4E0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Alms1Q8K4E0 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.47■■□□□ 1.19
Alms1Q8K4E0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Alms1Q8K4E0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Alms1Q8K4E0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Alms1Q8K4E0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Alms1Q8K4E0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Alms1Q8K4E0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Alms1Q8K4E0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Alms1Q8K4E0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Alms1Q8K4E0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.45■■□□□ 1.18
Alms1Q8K4E0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Alms1Q8K4E0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Alms1Q8K4E0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Alms1Q8K4E0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
Alms1Q8K4E0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Alms1Q8K4E0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Alms1Q8K4E0 Gm13238-201ENSMUST00000117655 780 ntBASIC22.44■■□□□ 1.18
Alms1Q8K4E0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Alms1Q8K4E0 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.42■■□□□ 1.18
Alms1Q8K4E0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Alms1Q8K4E0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.42■■□□□ 1.18
Alms1Q8K4E0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Alms1Q8K4E0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Alms1Q8K4E0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Alms1Q8K4E0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.42■■□□□ 1.18
Alms1Q8K4E0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Alms1Q8K4E0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Alms1Q8K4E0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Alms1Q8K4E0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Alms1Q8K4E0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Alms1Q8K4E0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.41■■□□□ 1.18
Alms1Q8K4E0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Alms1Q8K4E0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Alms1Q8K4E0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Alms1Q8K4E0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Alms1Q8K4E0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.4■■□□□ 1.18
Alms1Q8K4E0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Alms1Q8K4E0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Alms1Q8K4E0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Alms1Q8K4E0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Alms1Q8K4E0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Alms1Q8K4E0 Rps24-207ENSMUST00000224568 714 ntBASIC22.38■■□□□ 1.17
Alms1Q8K4E0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.37■■□□□ 1.17
Alms1Q8K4E0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
Alms1Q8K4E0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Alms1Q8K4E0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.36■■□□□ 1.17
Alms1Q8K4E0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Alms1Q8K4E0 Gm45102-201ENSMUST00000207427 857 ntBASIC22.35■■□□□ 1.17
Alms1Q8K4E0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Alms1Q8K4E0 Gm15820-201ENSMUST00000201566 728 ntBASIC22.34■■□□□ 1.17
Alms1Q8K4E0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Alms1Q8K4E0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.33■■□□□ 1.17
Alms1Q8K4E0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Alms1Q8K4E0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Alms1Q8K4E0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms