Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.63■■□□□ 1.05
Hmgcs1Q8JZK9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.63■■□□□ 1.05
Hmgcs1Q8JZK9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.62■■□□□ 1.05
Hmgcs1Q8JZK9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgcs1Q8JZK9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Hmgcs1Q8JZK9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgcs1Q8JZK9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgcs1Q8JZK9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Hmgcs1Q8JZK9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcs1Q8JZK9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Hmgcs1Q8JZK9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcs1Q8JZK9 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Hmgcs1Q8JZK9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Hmgcs1Q8JZK9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Hmgcs1Q8JZK9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Hmgcs1Q8JZK9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs1Q8JZK9 Gm8503-201ENSMUST00000118131 455 ntBASIC21.59■■□□□ 1.05
Hmgcs1Q8JZK9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs1Q8JZK9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs1Q8JZK9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs1Q8JZK9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Hmgcs1Q8JZK9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Hmgcs1Q8JZK9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcs1Q8JZK9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcs1Q8JZK9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Hmgcs1Q8JZK9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hmgcs1Q8JZK9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hmgcs1Q8JZK9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Hmgcs1Q8JZK9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs1Q8JZK9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs1Q8JZK9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs1Q8JZK9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs1Q8JZK9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.57■■□□□ 1.04
Hmgcs1Q8JZK9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.57■■□□□ 1.04
Hmgcs1Q8JZK9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Hmgcs1Q8JZK9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs1Q8JZK9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Hmgcs1Q8JZK9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.56■■□□□ 1.04
Hmgcs1Q8JZK9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.56■■□□□ 1.04
Hmgcs1Q8JZK9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs1Q8JZK9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs1Q8JZK9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Hmgcs1Q8JZK9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hmgcs1Q8JZK9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.55■■□□□ 1.04
Hmgcs1Q8JZK9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hmgcs1Q8JZK9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Hmgcs1Q8JZK9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs1Q8JZK9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs1Q8JZK9 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs1Q8JZK9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hmgcs1Q8JZK9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs1Q8JZK9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs1Q8JZK9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Hmgcs1Q8JZK9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs1Q8JZK9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hmgcs1Q8JZK9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hmgcs1Q8JZK9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.52■■□□□ 1.03
Hmgcs1Q8JZK9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Hmgcs1Q8JZK9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgcs1Q8JZK9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgcs1Q8JZK9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hmgcs1Q8JZK9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.5■■□□□ 1.03
Hmgcs1Q8JZK9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hmgcs1Q8JZK9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Hmgcs1Q8JZK9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
Hmgcs1Q8JZK9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs1Q8JZK9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.49■■□□□ 1.03
Hmgcs1Q8JZK9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs1Q8JZK9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Hmgcs1Q8JZK9 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hmgcs1Q8JZK9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgcs1Q8JZK9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Hmgcs1Q8JZK9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
Hmgcs1Q8JZK9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.48■■□□□ 1.03
Hmgcs1Q8JZK9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hmgcs1Q8JZK9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
Hmgcs1Q8JZK9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs1Q8JZK9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hmgcs1Q8JZK9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs1Q8JZK9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs1Q8JZK9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs1Q8JZK9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs1Q8JZK9 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs1Q8JZK9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hmgcs1Q8JZK9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hmgcs1Q8JZK9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hmgcs1Q8JZK9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hmgcs1Q8JZK9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Hmgcs1Q8JZK9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hmgcs1Q8JZK9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs1Q8JZK9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Hmgcs1Q8JZK9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms