Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.3■■□□□ 1
Hist1h2aaQ8CGP4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h2aaQ8CGP4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h2aaQ8CGP4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h2aaQ8CGP4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Hist1h2aaQ8CGP4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2aaQ8CGP4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2aaQ8CGP4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2aaQ8CGP4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2aaQ8CGP4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2aaQ8CGP4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Hist1h2aaQ8CGP4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Hist1h2aaQ8CGP4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hist1h2aaQ8CGP4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h2aaQ8CGP4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Hist1h2aaQ8CGP4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.28■■□□□ 1
Hist1h2aaQ8CGP4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.28■■□□□ 1
Hist1h2aaQ8CGP4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Hist1h2aaQ8CGP4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.27■■□□□ 1
Hist1h2aaQ8CGP4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Hist1h2aaQ8CGP4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.27■□□□□ 0.99
Hist1h2aaQ8CGP4 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.26■□□□□ 0.99
Hist1h2aaQ8CGP4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hist1h2aaQ8CGP4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hist1h2aaQ8CGP4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Hist1h2aaQ8CGP4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hist1h2aaQ8CGP4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h2aaQ8CGP4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h2aaQ8CGP4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Hist1h2aaQ8CGP4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hist1h2aaQ8CGP4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h2aaQ8CGP4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Hist1h2aaQ8CGP4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hist1h2aaQ8CGP4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Hist1h2aaQ8CGP4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.24■□□□□ 0.99
Hist1h2aaQ8CGP4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Hist1h2aaQ8CGP4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Hist1h2aaQ8CGP4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hist1h2aaQ8CGP4 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.22■□□□□ 0.99
Hist1h2aaQ8CGP4 Mir3960-201ENSMUST00000198213 73 ntBASIC21.22■□□□□ 0.99
Hist1h2aaQ8CGP4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hist1h2aaQ8CGP4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hist1h2aaQ8CGP4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.21■□□□□ 0.99
Hist1h2aaQ8CGP4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hist1h2aaQ8CGP4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Hist1h2aaQ8CGP4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hist1h2aaQ8CGP4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hist1h2aaQ8CGP4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Hist1h2aaQ8CGP4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.21■□□□□ 0.99
Hist1h2aaQ8CGP4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hist1h2aaQ8CGP4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hist1h2aaQ8CGP4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hist1h2aaQ8CGP4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hist1h2aaQ8CGP4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hist1h2aaQ8CGP4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.19■□□□□ 0.98
Hist1h2aaQ8CGP4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hist1h2aaQ8CGP4 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.18■□□□□ 0.98
Hist1h2aaQ8CGP4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hist1h2aaQ8CGP4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hist1h2aaQ8CGP4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hist1h2aaQ8CGP4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Hist1h2aaQ8CGP4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aaQ8CGP4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aaQ8CGP4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aaQ8CGP4 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.16■□□□□ 0.98
Hist1h2aaQ8CGP4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aaQ8CGP4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hist1h2aaQ8CGP4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hist1h2aaQ8CGP4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hist1h2aaQ8CGP4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hist1h2aaQ8CGP4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.14■□□□□ 0.98
Hist1h2aaQ8CGP4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hist1h2aaQ8CGP4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h2aaQ8CGP4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h2aaQ8CGP4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h2aaQ8CGP4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h2aaQ8CGP4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hist1h2aaQ8CGP4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hist1h2aaQ8CGP4 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.12■□□□□ 0.97
Hist1h2aaQ8CGP4 Gm9812-201ENSMUST00000061934 968 ntBASIC21.12■□□□□ 0.97
Hist1h2aaQ8CGP4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hist1h2aaQ8CGP4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h2aaQ8CGP4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h2aaQ8CGP4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Hist1h2aaQ8CGP4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hist1h2aaQ8CGP4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Hist1h2aaQ8CGP4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hist1h2aaQ8CGP4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hist1h2aaQ8CGP4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Hist1h2aaQ8CGP4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.1■□□□□ 0.97
Hist1h2aaQ8CGP4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hist1h2aaQ8CGP4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Hist1h2aaQ8CGP4 Gm6311-201ENSMUST00000073790 878 ntBASIC21.09■□□□□ 0.97
Hist1h2aaQ8CGP4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Hist1h2aaQ8CGP4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hist1h2aaQ8CGP4 Gm45364-201ENSMUST00000210883 159 ntBASIC21.08■□□□□ 0.97
Hist1h2aaQ8CGP4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Hist1h2aaQ8CGP4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Hist1h2aaQ8CGP4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hist1h2aaQ8CGP4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms