Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Rp1l1Q8CGM2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24,65■■□□□ 1,54
Rp1l1Q8CGM2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
Rp1l1Q8CGM2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC24,65■■□□□ 1,54
Rp1l1Q8CGM2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24,65■■□□□ 1,54
Rp1l1Q8CGM2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,54
Rp1l1Q8CGM2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24,64■■□□□ 1,53
Rp1l1Q8CGM2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,53
Rp1l1Q8CGM2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24,62■■□□□ 1,53
Rp1l1Q8CGM2 Gm43592-201ENSMUST00000196922 1165 ntBASIC24,62■■□□□ 1,53
Rp1l1Q8CGM2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24,62■■□□□ 1,53
Rp1l1Q8CGM2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24,62■■□□□ 1,53
Rp1l1Q8CGM2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24,61■■□□□ 1,53
Rp1l1Q8CGM2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24,61■■□□□ 1,53
Rp1l1Q8CGM2 Gm44428-201ENSMUST00000204474 874 ntBASIC24,61■■□□□ 1,53
Rp1l1Q8CGM2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24,61■■□□□ 1,53
Rp1l1Q8CGM2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Rp1l1Q8CGM2 Gm45444-201ENSMUST00000211394 898 ntBASIC24,6■■□□□ 1,53
Rp1l1Q8CGM2 Rps24-207ENSMUST00000224568 714 ntBASIC24,6■■□□□ 1,53
Rp1l1Q8CGM2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Rp1l1Q8CGM2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24,59■■□□□ 1,53
Rp1l1Q8CGM2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24,59■■□□□ 1,53
Rp1l1Q8CGM2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Rp1l1Q8CGM2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24,58■■□□□ 1,53
Rp1l1Q8CGM2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,52
Rp1l1Q8CGM2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24,58■■□□□ 1,52
Rp1l1Q8CGM2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,52
Rp1l1Q8CGM2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24,57■■□□□ 1,52
Rp1l1Q8CGM2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24,57■■□□□ 1,52
Rp1l1Q8CGM2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24,56■■□□□ 1,52
Rp1l1Q8CGM2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24,56■■□□□ 1,52
Rp1l1Q8CGM2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24,56■■□□□ 1,52
Rp1l1Q8CGM2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24,56■■□□□ 1,52
Rp1l1Q8CGM2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Rp1l1Q8CGM2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Rp1l1Q8CGM2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24,53■■□□□ 1,52
Rp1l1Q8CGM2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24,52■■□□□ 1,52
Rp1l1Q8CGM2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24,51■■□□□ 1,51
Rp1l1Q8CGM2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24,51■■□□□ 1,51
Rp1l1Q8CGM2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24,51■■□□□ 1,51
Rp1l1Q8CGM2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24,5■■□□□ 1,51
Rp1l1Q8CGM2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24,5■■□□□ 1,51
Rp1l1Q8CGM2 Gm45102-201ENSMUST00000207427 857 ntBASIC24,5■■□□□ 1,51
Rp1l1Q8CGM2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24,5■■□□□ 1,51
Rp1l1Q8CGM2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC24,49■■□□□ 1,51
Rp1l1Q8CGM2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24,49■■□□□ 1,51
Rp1l1Q8CGM2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Rp1l1Q8CGM2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24,49■■□□□ 1,51
Rp1l1Q8CGM2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24,49■■□□□ 1,51
Rp1l1Q8CGM2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Rp1l1Q8CGM2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24,49■■□□□ 1,51
Rp1l1Q8CGM2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Rp1l1Q8CGM2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Rp1l1Q8CGM2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
Rp1l1Q8CGM2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24,47■■□□□ 1,51
Rp1l1Q8CGM2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24,46■■□□□ 1,51
Rp1l1Q8CGM2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24,46■■□□□ 1,51
Rp1l1Q8CGM2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24,45■■□□□ 1,5
Rp1l1Q8CGM2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24,45■■□□□ 1,5
Rp1l1Q8CGM2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24,44■■□□□ 1,5
Rp1l1Q8CGM2 Nsd1-203ENSMUST00000224156 1149 ntBASIC24,43■■□□□ 1,5
Rp1l1Q8CGM2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24,43■■□□□ 1,5
Rp1l1Q8CGM2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24,43■■□□□ 1,5
Rp1l1Q8CGM2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24,42■■□□□ 1,5
Rp1l1Q8CGM2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24,42■■□□□ 1,5
Rp1l1Q8CGM2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24,42■■□□□ 1,5
Rp1l1Q8CGM2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24,41■■□□□ 1,5
Rp1l1Q8CGM2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24,41■■□□□ 1,5
Rp1l1Q8CGM2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24,41■■□□□ 1,5
Rp1l1Q8CGM2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24,41■■□□□ 1,5
Rp1l1Q8CGM2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24,41■■□□□ 1,5
Rp1l1Q8CGM2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24,41■■□□□ 1,5
Rp1l1Q8CGM2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24,4■■□□□ 1,5
Rp1l1Q8CGM2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24,4■■□□□ 1,5
Rp1l1Q8CGM2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24,4■■□□□ 1,5
Rp1l1Q8CGM2 Gm9959-201ENSMUST00000068277 390 ntBASIC24,4■■□□□ 1,5
Rp1l1Q8CGM2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24,4■■□□□ 1,5
Rp1l1Q8CGM2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24,39■■□□□ 1,5
Rp1l1Q8CGM2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,49
Rp1l1Q8CGM2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24,38■■□□□ 1,49
Rp1l1Q8CGM2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Rp1l1Q8CGM2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24,38■■□□□ 1,49
Rp1l1Q8CGM2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Rp1l1Q8CGM2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24,38■■□□□ 1,49
Rp1l1Q8CGM2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Rp1l1Q8CGM2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Rp1l1Q8CGM2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24,36■■□□□ 1,49
Rp1l1Q8CGM2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Rp1l1Q8CGM2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24,36■■□□□ 1,49
Rp1l1Q8CGM2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24,36■■□□□ 1,49
Rp1l1Q8CGM2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24,36■■□□□ 1,49
Rp1l1Q8CGM2 Zxda-201ENSMUST00000117281 2621 ntBASIC24,36■■□□□ 1,49
Rp1l1Q8CGM2 Gm43445-201ENSMUST00000198564 2091 ntBASIC24,35■■□□□ 1,49
Rp1l1Q8CGM2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24,35■■□□□ 1,49
Rp1l1Q8CGM2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24,34■■□□□ 1,49
Rp1l1Q8CGM2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Rp1l1Q8CGM2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Rp1l1Q8CGM2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Rp1l1Q8CGM2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24,34■■□□□ 1,49
Rp1l1Q8CGM2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms