Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.53■■□□□ 1.68
Zswim3Q8CFL8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
Zswim3Q8CFL8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Zswim3Q8CFL8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Zswim3Q8CFL8 Gm45444-201ENSMUST00000211394 898 ntBASIC25.52■■□□□ 1.68
Zswim3Q8CFL8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Zswim3Q8CFL8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.52■■□□□ 1.68
Zswim3Q8CFL8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Zswim3Q8CFL8 Gm44428-201ENSMUST00000204474 874 ntBASIC25.51■■□□□ 1.67
Zswim3Q8CFL8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC25.51■■□□□ 1.67
Zswim3Q8CFL8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.5■■□□□ 1.67
Zswim3Q8CFL8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.49■■□□□ 1.67
Zswim3Q8CFL8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Zswim3Q8CFL8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Zswim3Q8CFL8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.49■■□□□ 1.67
Zswim3Q8CFL8 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.49■■□□□ 1.67
Zswim3Q8CFL8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
Zswim3Q8CFL8 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.49■■□□□ 1.67
Zswim3Q8CFL8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Zswim3Q8CFL8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Zswim3Q8CFL8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Zswim3Q8CFL8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
Zswim3Q8CFL8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.48■■□□□ 1.67
Zswim3Q8CFL8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.48■■□□□ 1.67
Zswim3Q8CFL8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.48■■□□□ 1.67
Zswim3Q8CFL8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Zswim3Q8CFL8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Zswim3Q8CFL8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Zswim3Q8CFL8 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.46■■□□□ 1.67
Zswim3Q8CFL8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Zswim3Q8CFL8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Zswim3Q8CFL8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Zswim3Q8CFL8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Zswim3Q8CFL8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Zswim3Q8CFL8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Zswim3Q8CFL8 Gm9959-201ENSMUST00000068277 390 ntBASIC25.45■■□□□ 1.66
Zswim3Q8CFL8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Zswim3Q8CFL8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Zswim3Q8CFL8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Zswim3Q8CFL8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Zswim3Q8CFL8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Zswim3Q8CFL8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Zswim3Q8CFL8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.43■■□□□ 1.66
Zswim3Q8CFL8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Zswim3Q8CFL8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.42■■□□□ 1.66
Zswim3Q8CFL8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.42■■□□□ 1.66
Zswim3Q8CFL8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Zswim3Q8CFL8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Zswim3Q8CFL8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
Zswim3Q8CFL8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Zswim3Q8CFL8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.4■■□□□ 1.66
Zswim3Q8CFL8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Zswim3Q8CFL8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Zswim3Q8CFL8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Zswim3Q8CFL8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.39■■□□□ 1.65
Zswim3Q8CFL8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Zswim3Q8CFL8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Zswim3Q8CFL8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Zswim3Q8CFL8 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.38■■□□□ 1.65
Zswim3Q8CFL8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Zswim3Q8CFL8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Zswim3Q8CFL8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Zswim3Q8CFL8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Zswim3Q8CFL8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Zswim3Q8CFL8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.36■■□□□ 1.65
Zswim3Q8CFL8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Zswim3Q8CFL8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Zswim3Q8CFL8 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Zswim3Q8CFL8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Zswim3Q8CFL8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Zswim3Q8CFL8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Zswim3Q8CFL8 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.34■■□□□ 1.65
Zswim3Q8CFL8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Zswim3Q8CFL8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Zswim3Q8CFL8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Zswim3Q8CFL8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.33■■□□□ 1.65
Zswim3Q8CFL8 Zxda-201ENSMUST00000117281 2621 ntBASIC25.33■■□□□ 1.65
Zswim3Q8CFL8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Zswim3Q8CFL8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Zswim3Q8CFL8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.32■■□□□ 1.64
Zswim3Q8CFL8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.32■■□□□ 1.64
Zswim3Q8CFL8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Zswim3Q8CFL8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.31■■□□□ 1.64
Zswim3Q8CFL8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Zswim3Q8CFL8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Zswim3Q8CFL8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Zswim3Q8CFL8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Zswim3Q8CFL8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Zswim3Q8CFL8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Zswim3Q8CFL8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Zswim3Q8CFL8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.28■■□□□ 1.64
Zswim3Q8CFL8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Zswim3Q8CFL8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.27■■□□□ 1.64
Zswim3Q8CFL8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Zswim3Q8CFL8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Zswim3Q8CFL8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Zswim3Q8CFL8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.26■■□□□ 1.63
Zswim3Q8CFL8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.26■■□□□ 1.63
Zswim3Q8CFL8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
Zswim3Q8CFL8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.25■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms