Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Rtp1Q8C8C1 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rtp1Q8C8C1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Rtp1Q8C8C1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rtp1Q8C8C1 Amer2-203ENSMUST00000225247 2662 ntBASIC26.58■■□□□ 1.85
Rtp1Q8C8C1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rtp1Q8C8C1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rtp1Q8C8C1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.57■■□□□ 1.84
Rtp1Q8C8C1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
Rtp1Q8C8C1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.56■■□□□ 1.84
Rtp1Q8C8C1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rtp1Q8C8C1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.55■■□□□ 1.84
Rtp1Q8C8C1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
Rtp1Q8C8C1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Rtp1Q8C8C1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.53■■□□□ 1.84
Rtp1Q8C8C1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.53■■□□□ 1.84
Rtp1Q8C8C1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.53■■□□□ 1.84
Rtp1Q8C8C1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
Rtp1Q8C8C1 Gm43566-201ENSMUST00000196851 808 ntBASIC26.53■■□□□ 1.84
Rtp1Q8C8C1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rtp1Q8C8C1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Rtp1Q8C8C1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rtp1Q8C8C1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Rtp1Q8C8C1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rtp1Q8C8C1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.51■■□□□ 1.83
Rtp1Q8C8C1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rtp1Q8C8C1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.51■■□□□ 1.83
Rtp1Q8C8C1 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.51■■□□□ 1.83
Rtp1Q8C8C1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Rtp1Q8C8C1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rtp1Q8C8C1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.5■■□□□ 1.83
Rtp1Q8C8C1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC26.5■■□□□ 1.83
Rtp1Q8C8C1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Rtp1Q8C8C1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.49■■□□□ 1.83
Rtp1Q8C8C1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Rtp1Q8C8C1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Rtp1Q8C8C1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Rtp1Q8C8C1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Rtp1Q8C8C1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.48■■□□□ 1.83
Rtp1Q8C8C1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Rtp1Q8C8C1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Rtp1Q8C8C1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
Rtp1Q8C8C1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rtp1Q8C8C1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Rtp1Q8C8C1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Rtp1Q8C8C1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rtp1Q8C8C1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rtp1Q8C8C1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Rtp1Q8C8C1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Rtp1Q8C8C1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.43■■□□□ 1.82
Rtp1Q8C8C1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC26.43■■□□□ 1.82
Rtp1Q8C8C1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Rtp1Q8C8C1 Gm9959-201ENSMUST00000068277 390 ntBASIC26.42■■□□□ 1.82
Rtp1Q8C8C1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rtp1Q8C8C1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Rtp1Q8C8C1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Rtp1Q8C8C1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.4■■□□□ 1.82
Rtp1Q8C8C1 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.4■■□□□ 1.82
Rtp1Q8C8C1 Gm44428-201ENSMUST00000204474 874 ntBASIC26.4■■□□□ 1.82
Rtp1Q8C8C1 Gm45444-201ENSMUST00000211394 898 ntBASIC26.4■■□□□ 1.82
Rtp1Q8C8C1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtp1Q8C8C1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Rtp1Q8C8C1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtp1Q8C8C1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtp1Q8C8C1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rtp1Q8C8C1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Rtp1Q8C8C1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Rtp1Q8C8C1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Rtp1Q8C8C1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Rtp1Q8C8C1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtp1Q8C8C1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
Rtp1Q8C8C1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
Rtp1Q8C8C1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rtp1Q8C8C1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Rtp1Q8C8C1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtp1Q8C8C1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Rtp1Q8C8C1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rtp1Q8C8C1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
Rtp1Q8C8C1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Rtp1Q8C8C1 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.35■■□□□ 1.81
Rtp1Q8C8C1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.35■■□□□ 1.81
Rtp1Q8C8C1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rtp1Q8C8C1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Rtp1Q8C8C1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rtp1Q8C8C1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Rtp1Q8C8C1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.32■■□□□ 1.8
Rtp1Q8C8C1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Rtp1Q8C8C1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.31■■□□□ 1.8
Rtp1Q8C8C1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Rtp1Q8C8C1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.31■■□□□ 1.8
Rtp1Q8C8C1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC26.31■■□□□ 1.8
Rtp1Q8C8C1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.31■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms