Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.64■■□□□ 1.21
Pabpc5Q8C7D3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.64■■□□□ 1.21
Pabpc5Q8C7D3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pabpc5Q8C7D3 Gm9812-201ENSMUST00000061934 968 ntBASIC22.63■■□□□ 1.21
Pabpc5Q8C7D3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pabpc5Q8C7D3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pabpc5Q8C7D3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pabpc5Q8C7D3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Pabpc5Q8C7D3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pabpc5Q8C7D3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pabpc5Q8C7D3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pabpc5Q8C7D3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Pabpc5Q8C7D3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pabpc5Q8C7D3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pabpc5Q8C7D3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pabpc5Q8C7D3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pabpc5Q8C7D3 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Gm12366-201ENSMUST00000121722 873 ntBASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Gm5786-201ENSMUST00000085368 882 ntBASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pabpc5Q8C7D3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 Gm11687-201ENSMUST00000118911 886 ntBASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 Scarna2-201ENSMUST00000157560 414 ntBASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pabpc5Q8C7D3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.58■■□□□ 1.21
Pabpc5Q8C7D3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pabpc5Q8C7D3 Gm9806-201ENSMUST00000051080 552 ntBASIC22.57■■□□□ 1.2
Pabpc5Q8C7D3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pabpc5Q8C7D3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pabpc5Q8C7D3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pabpc5Q8C7D3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.56■■□□□ 1.2
Pabpc5Q8C7D3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Pabpc5Q8C7D3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pabpc5Q8C7D3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.56■■□□□ 1.2
Pabpc5Q8C7D3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Pabpc5Q8C7D3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pabpc5Q8C7D3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pabpc5Q8C7D3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pabpc5Q8C7D3 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.54■■□□□ 1.2
Pabpc5Q8C7D3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pabpc5Q8C7D3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pabpc5Q8C7D3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.53■■□□□ 1.2
Pabpc5Q8C7D3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pabpc5Q8C7D3 Gm15039-201ENSMUST00000118914 875 ntBASIC22.52■■□□□ 1.2
Pabpc5Q8C7D3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pabpc5Q8C7D3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.51■■□□□ 1.19
Pabpc5Q8C7D3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 Gm16437-201ENSMUST00000025669 507 ntBASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pabpc5Q8C7D3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpc5Q8C7D3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.49■■□□□ 1.19
Pabpc5Q8C7D3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Pabpc5Q8C7D3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpc5Q8C7D3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpc5Q8C7D3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pabpc5Q8C7D3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Pabpc5Q8C7D3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Pabpc5Q8C7D3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.48■■□□□ 1.19
Pabpc5Q8C7D3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pabpc5Q8C7D3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.47■■□□□ 1.19
Pabpc5Q8C7D3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pabpc5Q8C7D3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Pabpc5Q8C7D3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pabpc5Q8C7D3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pabpc5Q8C7D3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Pabpc5Q8C7D3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
Pabpc5Q8C7D3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Pabpc5Q8C7D3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.45■■□□□ 1.18
Pabpc5Q8C7D3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pabpc5Q8C7D3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Terc-201ENSMUST00000082862 423 ntBASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pabpc5Q8C7D3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms