Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Tsen54Q8C2A2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Tsen54Q8C2A2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tsen54Q8C2A2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tsen54Q8C2A2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Tsen54Q8C2A2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tsen54Q8C2A2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Tsen54Q8C2A2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tsen54Q8C2A2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Tsen54Q8C2A2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Tsen54Q8C2A2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tsen54Q8C2A2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tsen54Q8C2A2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Tsen54Q8C2A2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tsen54Q8C2A2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tsen54Q8C2A2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tsen54Q8C2A2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tsen54Q8C2A2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tsen54Q8C2A2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tsen54Q8C2A2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tsen54Q8C2A2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tsen54Q8C2A2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.85■□□□□ 0.61
Tsen54Q8C2A2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tsen54Q8C2A2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tsen54Q8C2A2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.85■□□□□ 0.61
Tsen54Q8C2A2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tsen54Q8C2A2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Tsen54Q8C2A2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tsen54Q8C2A2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tsen54Q8C2A2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tsen54Q8C2A2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.84■□□□□ 0.61
Tsen54Q8C2A2 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.84■□□□□ 0.61
Tsen54Q8C2A2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tsen54Q8C2A2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tsen54Q8C2A2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tsen54Q8C2A2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.83■□□□□ 0.61
Tsen54Q8C2A2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.83■□□□□ 0.61
Tsen54Q8C2A2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.83■□□□□ 0.6
Tsen54Q8C2A2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsen54Q8C2A2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tsen54Q8C2A2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tsen54Q8C2A2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsen54Q8C2A2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.82■□□□□ 0.6
Tsen54Q8C2A2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tsen54Q8C2A2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tsen54Q8C2A2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tsen54Q8C2A2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsen54Q8C2A2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsen54Q8C2A2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tsen54Q8C2A2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tsen54Q8C2A2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tsen54Q8C2A2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Tsen54Q8C2A2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsen54Q8C2A2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tsen54Q8C2A2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Tsen54Q8C2A2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tsen54Q8C2A2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.78■□□□□ 0.6
Tsen54Q8C2A2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tsen54Q8C2A2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.78■□□□□ 0.6
Tsen54Q8C2A2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tsen54Q8C2A2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tsen54Q8C2A2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tsen54Q8C2A2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tsen54Q8C2A2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tsen54Q8C2A2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tsen54Q8C2A2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tsen54Q8C2A2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.77■□□□□ 0.6
Tsen54Q8C2A2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tsen54Q8C2A2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tsen54Q8C2A2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tsen54Q8C2A2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Tsen54Q8C2A2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tsen54Q8C2A2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Tsen54Q8C2A2 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.77■□□□□ 0.59
Tsen54Q8C2A2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tsen54Q8C2A2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tsen54Q8C2A2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tsen54Q8C2A2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.75■□□□□ 0.59
Tsen54Q8C2A2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tsen54Q8C2A2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tsen54Q8C2A2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tsen54Q8C2A2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tsen54Q8C2A2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Tsen54Q8C2A2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.74■□□□□ 0.59
Tsen54Q8C2A2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Tsen54Q8C2A2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tsen54Q8C2A2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tsen54Q8C2A2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tsen54Q8C2A2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tsen54Q8C2A2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tsen54Q8C2A2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tsen54Q8C2A2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 1478.3 ms