Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Cps1Q8C196 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Cps1Q8C196 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Cps1Q8C196 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Cps1Q8C196 Gm15546-201ENSMUST00000122095 826 ntBASIC31.88■■■□□ 2.69
Cps1Q8C196 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Cps1Q8C196 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
Cps1Q8C196 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC31.85■■■□□ 2.69
Cps1Q8C196 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
Cps1Q8C196 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Cps1Q8C196 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
Cps1Q8C196 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC31.84■■■□□ 2.69
Cps1Q8C196 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC31.84■■■□□ 2.69
Cps1Q8C196 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
Cps1Q8C196 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.83■■■□□ 2.69
Cps1Q8C196 Gm43566-201ENSMUST00000196851 808 ntBASIC31.82■■■□□ 2.68
Cps1Q8C196 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Cps1Q8C196 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Cps1Q8C196 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC31.8■■■□□ 2.68
Cps1Q8C196 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
Cps1Q8C196 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC31.8■■■□□ 2.68
Cps1Q8C196 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Cps1Q8C196 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC31.79■■■□□ 2.68
Cps1Q8C196 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Cps1Q8C196 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Cps1Q8C196 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC31.78■■■□□ 2.68
Cps1Q8C196 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Cps1Q8C196 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Cps1Q8C196 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Cps1Q8C196 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Cps1Q8C196 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC31.76■■■□□ 2.68
Cps1Q8C196 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Cps1Q8C196 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC31.76■■■□□ 2.68
Cps1Q8C196 Gm4419-202ENSMUST00000226239 1431 ntBASIC31.76■■■□□ 2.67
Cps1Q8C196 Gm13238-201ENSMUST00000117655 780 ntBASIC31.75■■■□□ 2.67
Cps1Q8C196 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Cps1Q8C196 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC31.74■■■□□ 2.67
Cps1Q8C196 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Cps1Q8C196 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Cps1Q8C196 Gm43592-201ENSMUST00000196922 1165 ntBASIC31.73■■■□□ 2.67
Cps1Q8C196 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Cps1Q8C196 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC31.71■■■□□ 2.67
Cps1Q8C196 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.71■■■□□ 2.67
Cps1Q8C196 Gm45444-201ENSMUST00000211394 898 ntBASIC31.7■■■□□ 2.67
Cps1Q8C196 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC31.7■■■□□ 2.67
Cps1Q8C196 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
Cps1Q8C196 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC31.69■■■□□ 2.66
Cps1Q8C196 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC31.69■■■□□ 2.66
Cps1Q8C196 Gm15039-201ENSMUST00000118914 875 ntBASIC31.69■■■□□ 2.66
Cps1Q8C196 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Cps1Q8C196 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Cps1Q8C196 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cps1Q8C196 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
Cps1Q8C196 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC31.67■■■□□ 2.66
Cps1Q8C196 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Cps1Q8C196 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Cps1Q8C196 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC31.66■■■□□ 2.66
Cps1Q8C196 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC31.65■■■□□ 2.66
Cps1Q8C196 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cps1Q8C196 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cps1Q8C196 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Cps1Q8C196 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
Cps1Q8C196 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
Cps1Q8C196 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Cps1Q8C196 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC31.63■■■□□ 2.65
Cps1Q8C196 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC31.62■■■□□ 2.65
Cps1Q8C196 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Cps1Q8C196 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
Cps1Q8C196 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Cps1Q8C196 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
Cps1Q8C196 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Cps1Q8C196 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.6■■■□□ 2.65
Cps1Q8C196 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC31.6■■■□□ 2.65
Cps1Q8C196 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cps1Q8C196 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC31.58■■■□□ 2.65
Cps1Q8C196 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Cps1Q8C196 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC31.57■■■□□ 2.64
Cps1Q8C196 Gm15820-201ENSMUST00000201566 728 ntBASIC31.56■■■□□ 2.64
Cps1Q8C196 AC093043.1-201ENSMUST00000226700 898 ntBASIC31.56■■■□□ 2.64
Cps1Q8C196 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Cps1Q8C196 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cps1Q8C196 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cps1Q8C196 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cps1Q8C196 Nsd1-203ENSMUST00000224156 1149 ntBASIC31.55■■■□□ 2.64
Cps1Q8C196 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Cps1Q8C196 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cps1Q8C196 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Cps1Q8C196 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC31.54■■■□□ 2.64
Cps1Q8C196 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Cps1Q8C196 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC31.53■■■□□ 2.64
Cps1Q8C196 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC31.53■■■□□ 2.64
Cps1Q8C196 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Cps1Q8C196 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cps1Q8C196 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Cps1Q8C196 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Cps1Q8C196 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Cps1Q8C196 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cps1Q8C196 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cps1Q8C196 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
Cps1Q8C196 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC31.48■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms