Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdk5rap1Q8BTW8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.66■■□□□ 1.06
Cdk5rap1Q8BTW8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk5rap1Q8BTW8 Gm14523-201ENSMUST00000117260 558 ntBASIC21.65■■□□□ 1.06
Cdk5rap1Q8BTW8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk5rap1Q8BTW8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdk5rap1Q8BTW8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdk5rap1Q8BTW8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdk5rap1Q8BTW8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Gm7332-201ENSMUST00000118351 454 ntBASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdk5rap1Q8BTW8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdk5rap1Q8BTW8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Cdk5rap1Q8BTW8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.61■■□□□ 1.05
Cdk5rap1Q8BTW8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdk5rap1Q8BTW8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdk5rap1Q8BTW8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdk5rap1Q8BTW8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.58■■□□□ 1.05
Cdk5rap1Q8BTW8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cdk5rap1Q8BTW8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.58■■□□□ 1.04
Cdk5rap1Q8BTW8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdk5rap1Q8BTW8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.57■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk5rap1Q8BTW8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdk5rap1Q8BTW8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.56■■□□□ 1.04
Cdk5rap1Q8BTW8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdk5rap1Q8BTW8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cdk5rap1Q8BTW8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk5rap1Q8BTW8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk5rap1Q8BTW8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cdk5rap1Q8BTW8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm44428-201ENSMUST00000204474 874 ntBASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.53■■□□□ 1.04
Cdk5rap1Q8BTW8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk5rap1Q8BTW8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Cdk5rap1Q8BTW8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdk5rap1Q8BTW8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdk5rap1Q8BTW8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cdk5rap1Q8BTW8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdk5rap1Q8BTW8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cdk5rap1Q8BTW8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk5rap1Q8BTW8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdk5rap1Q8BTW8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.49■■□□□ 1.03
Cdk5rap1Q8BTW8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cdk5rap1Q8BTW8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cdk5rap1Q8BTW8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Cdk5rap1Q8BTW8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cdk5rap1Q8BTW8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Cdk5rap1Q8BTW8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms