Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Smg1Q8BKX6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Smg1Q8BKX6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.82■□□□□ 0.76
Smg1Q8BKX6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Smg1Q8BKX6 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.82■□□□□ 0.76
Smg1Q8BKX6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.82■□□□□ 0.76
Smg1Q8BKX6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Smg1Q8BKX6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.81■□□□□ 0.76
Smg1Q8BKX6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smg1Q8BKX6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.81■□□□□ 0.76
Smg1Q8BKX6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smg1Q8BKX6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Smg1Q8BKX6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smg1Q8BKX6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.8■□□□□ 0.76
Smg1Q8BKX6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
Smg1Q8BKX6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Smg1Q8BKX6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.79■□□□□ 0.76
Smg1Q8BKX6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smg1Q8BKX6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smg1Q8BKX6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.79■□□□□ 0.76
Smg1Q8BKX6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smg1Q8BKX6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Smg1Q8BKX6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smg1Q8BKX6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smg1Q8BKX6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.78■□□□□ 0.76
Smg1Q8BKX6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smg1Q8BKX6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smg1Q8BKX6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smg1Q8BKX6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smg1Q8BKX6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smg1Q8BKX6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smg1Q8BKX6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smg1Q8BKX6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smg1Q8BKX6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smg1Q8BKX6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.75■□□□□ 0.75
Smg1Q8BKX6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.75■□□□□ 0.75
Smg1Q8BKX6 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.75■□□□□ 0.75
Smg1Q8BKX6 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.75■□□□□ 0.75
Smg1Q8BKX6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smg1Q8BKX6 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smg1Q8BKX6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smg1Q8BKX6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smg1Q8BKX6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smg1Q8BKX6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smg1Q8BKX6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smg1Q8BKX6 Gm45444-201ENSMUST00000211394 898 ntBASIC19.74■□□□□ 0.75
Smg1Q8BKX6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smg1Q8BKX6 Zxda-201ENSMUST00000117281 2621 ntBASIC19.73■□□□□ 0.75
Smg1Q8BKX6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smg1Q8BKX6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Smg1Q8BKX6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smg1Q8BKX6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smg1Q8BKX6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.71■□□□□ 0.75
Smg1Q8BKX6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smg1Q8BKX6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smg1Q8BKX6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smg1Q8BKX6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Smg1Q8BKX6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg1Q8BKX6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smg1Q8BKX6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smg1Q8BKX6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smg1Q8BKX6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smg1Q8BKX6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.68■□□□□ 0.74
Smg1Q8BKX6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smg1Q8BKX6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.67■□□□□ 0.74
Smg1Q8BKX6 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.67■□□□□ 0.74
Smg1Q8BKX6 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smg1Q8BKX6 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.67■□□□□ 0.74
Smg1Q8BKX6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smg1Q8BKX6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smg1Q8BKX6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smg1Q8BKX6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg1Q8BKX6 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.66■□□□□ 0.74
Smg1Q8BKX6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smg1Q8BKX6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.66■□□□□ 0.74
Smg1Q8BKX6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg1Q8BKX6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smg1Q8BKX6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Etf1-202ENSMUST00000180351 108 ntBASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Gm37136-201ENSMUST00000194368 194 ntBASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.65■□□□□ 0.74
Smg1Q8BKX6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.64■□□□□ 0.73
Smg1Q8BKX6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smg1Q8BKX6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smg1Q8BKX6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms