Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim23Q8BGX0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim23Q8BGX0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim23Q8BGX0 Gm16437-201ENSMUST00000025669 507 ntBASIC22■■□□□ 1.11
Trim23Q8BGX0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim23Q8BGX0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.99■■□□□ 1.11
Trim23Q8BGX0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Gm11687-201ENSMUST00000118911 886 ntBASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim23Q8BGX0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim23Q8BGX0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim23Q8BGX0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Trim23Q8BGX0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim23Q8BGX0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.95■■□□□ 1.1
Trim23Q8BGX0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim23Q8BGX0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.93■■□□□ 1.1
Trim23Q8BGX0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim23Q8BGX0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim23Q8BGX0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim23Q8BGX0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim23Q8BGX0 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim23Q8BGX0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim23Q8BGX0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim23Q8BGX0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim23Q8BGX0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim23Q8BGX0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Trim23Q8BGX0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim23Q8BGX0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim23Q8BGX0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim23Q8BGX0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim23Q8BGX0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim23Q8BGX0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.86■■□□□ 1.09
Trim23Q8BGX0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim23Q8BGX0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.85■■□□□ 1.09
Trim23Q8BGX0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Trim23Q8BGX0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Trim23Q8BGX0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trim23Q8BGX0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Trim23Q8BGX0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim23Q8BGX0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trim23Q8BGX0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim23Q8BGX0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim23Q8BGX0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim23Q8BGX0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim23Q8BGX0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim23Q8BGX0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
Trim23Q8BGX0 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim23Q8BGX0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim23Q8BGX0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.8■■□□□ 1.08
Trim23Q8BGX0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim23Q8BGX0 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.8■■□□□ 1.08
Trim23Q8BGX0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim23Q8BGX0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.79■■□□□ 1.08
Trim23Q8BGX0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.79■■□□□ 1.08
Trim23Q8BGX0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.79■■□□□ 1.08
Trim23Q8BGX0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim23Q8BGX0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
Trim23Q8BGX0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.78■■□□□ 1.08
Trim23Q8BGX0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms