Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trnp1Q80ZI1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Trnp1Q80ZI1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Gm15820-201ENSMUST00000201566 728 ntBASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Trnp1Q80ZI1 Zxda-201ENSMUST00000117281 2621 ntBASIC26.49■■□□□ 1.83
Trnp1Q80ZI1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Trnp1Q80ZI1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trnp1Q80ZI1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trnp1Q80ZI1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC26.47■■□□□ 1.83
Trnp1Q80ZI1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Trnp1Q80ZI1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.46■■□□□ 1.83
Trnp1Q80ZI1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Trnp1Q80ZI1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC26.46■■□□□ 1.83
Trnp1Q80ZI1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Trnp1Q80ZI1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Trnp1Q80ZI1 Gm45102-201ENSMUST00000207427 857 ntBASIC26.45■■□□□ 1.82
Trnp1Q80ZI1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Trnp1Q80ZI1 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.44■■□□□ 1.82
Trnp1Q80ZI1 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.44■■□□□ 1.82
Trnp1Q80ZI1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trnp1Q80ZI1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trnp1Q80ZI1 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.43■■□□□ 1.82
Trnp1Q80ZI1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trnp1Q80ZI1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trnp1Q80ZI1 Gm45444-201ENSMUST00000211394 898 ntBASIC26.42■■□□□ 1.82
Trnp1Q80ZI1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trnp1Q80ZI1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.41■■□□□ 1.82
Trnp1Q80ZI1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
Trnp1Q80ZI1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Trnp1Q80ZI1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trnp1Q80ZI1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC26.39■■□□□ 1.82
Trnp1Q80ZI1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trnp1Q80ZI1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trnp1Q80ZI1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Trnp1Q80ZI1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trnp1Q80ZI1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Trnp1Q80ZI1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trnp1Q80ZI1 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trnp1Q80ZI1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
Trnp1Q80ZI1 Gm14117-201ENSMUST00000122417 843 ntBASIC26.35■■□□□ 1.81
Trnp1Q80ZI1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Trnp1Q80ZI1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trnp1Q80ZI1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trnp1Q80ZI1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.33■■□□□ 1.81
Trnp1Q80ZI1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trnp1Q80ZI1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trnp1Q80ZI1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trnp1Q80ZI1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trnp1Q80ZI1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.3■■□□□ 1.8
Trnp1Q80ZI1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.3■■□□□ 1.8
Trnp1Q80ZI1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trnp1Q80ZI1 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.29■■□□□ 1.8
Trnp1Q80ZI1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.29■■□□□ 1.8
Trnp1Q80ZI1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.29■■□□□ 1.8
Trnp1Q80ZI1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Trnp1Q80ZI1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trnp1Q80ZI1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Trnp1Q80ZI1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trnp1Q80ZI1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trnp1Q80ZI1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
Trnp1Q80ZI1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trnp1Q80ZI1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.26■■□□□ 1.79
Trnp1Q80ZI1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Trnp1Q80ZI1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trnp1Q80ZI1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trnp1Q80ZI1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.24■■□□□ 1.79
Trnp1Q80ZI1 Gm9959-201ENSMUST00000068277 390 ntBASIC26.24■■□□□ 1.79
Trnp1Q80ZI1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trnp1Q80ZI1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Trnp1Q80ZI1 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.23■■□□□ 1.79
Trnp1Q80ZI1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trnp1Q80ZI1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC26.22■■□□□ 1.79
Trnp1Q80ZI1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.22■■□□□ 1.79
Trnp1Q80ZI1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Trnp1Q80ZI1 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.21■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms