Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Scn10aQ6QIY3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Scn10aQ6QIY3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Scn10aQ6QIY3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.87■■□□□ 1.89
Scn10aQ6QIY3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Scn10aQ6QIY3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Scn10aQ6QIY3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.86■■□□□ 1.89
Scn10aQ6QIY3 Gm13238-201ENSMUST00000117655 780 ntBASIC26.86■■□□□ 1.89
Scn10aQ6QIY3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Scn10aQ6QIY3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Scn10aQ6QIY3 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.84■■□□□ 1.89
Scn10aQ6QIY3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Scn10aQ6QIY3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
Scn10aQ6QIY3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Scn10aQ6QIY3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Scn10aQ6QIY3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Scn10aQ6QIY3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Scn10aQ6QIY3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Scn10aQ6QIY3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Scn10aQ6QIY3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Scn10aQ6QIY3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Scn10aQ6QIY3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Scn10aQ6QIY3 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Scn10aQ6QIY3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 Gm45444-201ENSMUST00000211394 898 ntBASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Scn10aQ6QIY3 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.77■■□□□ 1.88
Scn10aQ6QIY3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Scn10aQ6QIY3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.76■■□□□ 1.87
Scn10aQ6QIY3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Scn10aQ6QIY3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Scn10aQ6QIY3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Scn10aQ6QIY3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.74■■□□□ 1.87
Scn10aQ6QIY3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Scn10aQ6QIY3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Scn10aQ6QIY3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Scn10aQ6QIY3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.73■■□□□ 1.87
Scn10aQ6QIY3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Scn10aQ6QIY3 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.7■■□□□ 1.87
Scn10aQ6QIY3 Gm15820-201ENSMUST00000201566 728 ntBASIC26.7■■□□□ 1.86
Scn10aQ6QIY3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
Scn10aQ6QIY3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Scn10aQ6QIY3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Scn10aQ6QIY3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.69■■□□□ 1.86
Scn10aQ6QIY3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scn10aQ6QIY3 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scn10aQ6QIY3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.69■■□□□ 1.86
Scn10aQ6QIY3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Scn10aQ6QIY3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scn10aQ6QIY3 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scn10aQ6QIY3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
Scn10aQ6QIY3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scn10aQ6QIY3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scn10aQ6QIY3 Rps24-207ENSMUST00000224568 714 ntBASIC26.66■■□□□ 1.86
Scn10aQ6QIY3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Scn10aQ6QIY3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC26.65■■□□□ 1.86
Scn10aQ6QIY3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Scn10aQ6QIY3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Scn10aQ6QIY3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Scn10aQ6QIY3 Nsd1-203ENSMUST00000224156 1149 ntBASIC26.63■■□□□ 1.85
Scn10aQ6QIY3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Scn10aQ6QIY3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Scn10aQ6QIY3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Scn10aQ6QIY3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scn10aQ6QIY3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scn10aQ6QIY3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC26.62■■□□□ 1.85
Scn10aQ6QIY3 Gm14117-201ENSMUST00000122417 843 ntBASIC26.61■■□□□ 1.85
Scn10aQ6QIY3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Scn10aQ6QIY3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Scn10aQ6QIY3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.59■■□□□ 1.85
Scn10aQ6QIY3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.59■■□□□ 1.85
Scn10aQ6QIY3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scn10aQ6QIY3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scn10aQ6QIY3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Scn10aQ6QIY3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Scn10aQ6QIY3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Scn10aQ6QIY3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC26.57■■□□□ 1.84
Scn10aQ6QIY3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
Scn10aQ6QIY3 Gm45102-201ENSMUST00000207427 857 ntBASIC26.56■■□□□ 1.84
Scn10aQ6QIY3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
Scn10aQ6QIY3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Scn10aQ6QIY3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms