Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim45Q6PFY8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim45Q6PFY8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim45Q6PFY8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim45Q6PFY8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Trim45Q6PFY8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim45Q6PFY8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim45Q6PFY8 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.27■■□□□ 1
Trim45Q6PFY8 Mir3960-201ENSMUST00000198213 73 ntBASIC21.27■■□□□ 1
Trim45Q6PFY8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.26■□□□□ 0.99
Trim45Q6PFY8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim45Q6PFY8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim45Q6PFY8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim45Q6PFY8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim45Q6PFY8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim45Q6PFY8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trim45Q6PFY8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Trim45Q6PFY8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim45Q6PFY8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim45Q6PFY8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim45Q6PFY8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim45Q6PFY8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim45Q6PFY8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim45Q6PFY8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim45Q6PFY8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim45Q6PFY8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Gm45364-201ENSMUST00000210883 159 ntBASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim45Q6PFY8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim45Q6PFY8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim45Q6PFY8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim45Q6PFY8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim45Q6PFY8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim45Q6PFY8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trim45Q6PFY8 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.19■□□□□ 0.98
Trim45Q6PFY8 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.18■□□□□ 0.98
Trim45Q6PFY8 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim45Q6PFY8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim45Q6PFY8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim45Q6PFY8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim45Q6PFY8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim45Q6PFY8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim45Q6PFY8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim45Q6PFY8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim45Q6PFY8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim45Q6PFY8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim45Q6PFY8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.15■□□□□ 0.98
Trim45Q6PFY8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.15■□□□□ 0.98
Trim45Q6PFY8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.15■□□□□ 0.98
Trim45Q6PFY8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim45Q6PFY8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim45Q6PFY8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trim45Q6PFY8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim45Q6PFY8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.14■□□□□ 0.97
Trim45Q6PFY8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim45Q6PFY8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim45Q6PFY8 Scarna2-201ENSMUST00000157560 414 ntBASIC21.14■□□□□ 0.97
Trim45Q6PFY8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim45Q6PFY8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trim45Q6PFY8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Gm9806-201ENSMUST00000051080 552 ntBASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Gm9812-201ENSMUST00000061934 968 ntBASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Trim45Q6PFY8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim45Q6PFY8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trim45Q6PFY8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim45Q6PFY8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim45Q6PFY8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim45Q6PFY8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim45Q6PFY8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim45Q6PFY8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim45Q6PFY8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim45Q6PFY8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim45Q6PFY8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim45Q6PFY8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms