Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Gm12366-201ENSMUST00000121722 873 ntBASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Gm5786-201ENSMUST00000085368 882 ntBASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Kdm3aQ6PCM1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Kdm3aQ6PCM1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Kdm3aQ6PCM1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Kdm3aQ6PCM1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Kdm3aQ6PCM1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Kdm3aQ6PCM1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Kdm3aQ6PCM1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Kdm3aQ6PCM1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.71■■■□□ 2.03
Kdm3aQ6PCM1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Kdm3aQ6PCM1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Kdm3aQ6PCM1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Kdm3aQ6PCM1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.7■■■□□ 2.03
Kdm3aQ6PCM1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Kdm3aQ6PCM1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Kdm3aQ6PCM1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.69■■■□□ 2.02
Kdm3aQ6PCM1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.69■■■□□ 2.02
Kdm3aQ6PCM1 Gm27502-201ENSMUST00000183495 199 ntBASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Gm14523-201ENSMUST00000117260 558 ntBASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Kdm3aQ6PCM1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Kdm3aQ6PCM1 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.66■■■□□ 2.02
Kdm3aQ6PCM1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Kdm3aQ6PCM1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Kdm3aQ6PCM1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Kdm3aQ6PCM1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
Kdm3aQ6PCM1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Kdm3aQ6PCM1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
Kdm3aQ6PCM1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.64■■■□□ 2.01
Kdm3aQ6PCM1 Gm44428-201ENSMUST00000204474 874 ntBASIC27.64■■■□□ 2.01
Kdm3aQ6PCM1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Gm7332-201ENSMUST00000118351 454 ntBASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Kdm3aQ6PCM1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Kdm3aQ6PCM1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC27.6■■■□□ 2.01
Kdm3aQ6PCM1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Kdm3aQ6PCM1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.57■■■□□ 2
Kdm3aQ6PCM1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Kdm3aQ6PCM1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Kdm3aQ6PCM1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.56■■■□□ 2
Kdm3aQ6PCM1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
Kdm3aQ6PCM1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.56■■■□□ 2
Kdm3aQ6PCM1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Kdm3aQ6PCM1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.55■■■□□ 2
Kdm3aQ6PCM1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Kdm3aQ6PCM1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.55■■■□□ 2
Kdm3aQ6PCM1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Kdm3aQ6PCM1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.54■■■□□ 2
Kdm3aQ6PCM1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.54■■■□□ 2
Kdm3aQ6PCM1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.54■■■□□ 2
Kdm3aQ6PCM1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Kdm3aQ6PCM1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.53■■■□□ 2
Kdm3aQ6PCM1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Kdm3aQ6PCM1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.53■■■□□ 2
Kdm3aQ6PCM1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.53■■■□□ 2
Kdm3aQ6PCM1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms