Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ltn1Q6A009 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Ltn1Q6A009 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
Ltn1Q6A009 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ltn1Q6A009 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ltn1Q6A009 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Ltn1Q6A009 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ltn1Q6A009 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ltn1Q6A009 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Ltn1Q6A009 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Ltn1Q6A009 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Ltn1Q6A009 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ltn1Q6A009 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Ltn1Q6A009 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.84■■■□□ 2.05
Ltn1Q6A009 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ltn1Q6A009 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ltn1Q6A009 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Ltn1Q6A009 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Ltn1Q6A009 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.83■■■□□ 2.05
Ltn1Q6A009 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Ltn1Q6A009 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Ltn1Q6A009 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.82■■■□□ 2.04
Ltn1Q6A009 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.82■■■□□ 2.04
Ltn1Q6A009 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ltn1Q6A009 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Ltn1Q6A009 Gm5522-201ENSMUST00000189483 1242 ntBASIC27.81■■■□□ 2.04
Ltn1Q6A009 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Ltn1Q6A009 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.81■■■□□ 2.04
Ltn1Q6A009 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.8■■■□□ 2.04
Ltn1Q6A009 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Ltn1Q6A009 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Ltn1Q6A009 Gm44428-201ENSMUST00000204474 874 ntBASIC27.79■■■□□ 2.04
Ltn1Q6A009 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
Ltn1Q6A009 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Ltn1Q6A009 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Ltn1Q6A009 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Ltn1Q6A009 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Ltn1Q6A009 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ltn1Q6A009 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
Ltn1Q6A009 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC27.73■■■□□ 2.03
Ltn1Q6A009 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.73■■■□□ 2.03
Ltn1Q6A009 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Ltn1Q6A009 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ltn1Q6A009 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC27.72■■■□□ 2.03
Ltn1Q6A009 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Ltn1Q6A009 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
Ltn1Q6A009 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
Ltn1Q6A009 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC27.71■■■□□ 2.03
Ltn1Q6A009 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.71■■■□□ 2.03
Ltn1Q6A009 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ltn1Q6A009 Gm15546-201ENSMUST00000122095 826 ntBASIC27.71■■■□□ 2.03
Ltn1Q6A009 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC27.71■■■□□ 2.03
Ltn1Q6A009 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC27.71■■■□□ 2.03
Ltn1Q6A009 Gm43566-201ENSMUST00000196851 808 ntBASIC27.7■■■□□ 2.02
Ltn1Q6A009 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Ltn1Q6A009 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ltn1Q6A009 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
Ltn1Q6A009 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.68■■■□□ 2.02
Ltn1Q6A009 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ltn1Q6A009 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Ltn1Q6A009 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
Ltn1Q6A009 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ltn1Q6A009 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ltn1Q6A009 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Ltn1Q6A009 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Ltn1Q6A009 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.67■■■□□ 2.02
Ltn1Q6A009 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.66■■■□□ 2.02
Ltn1Q6A009 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ltn1Q6A009 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ltn1Q6A009 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ltn1Q6A009 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ltn1Q6A009 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ltn1Q6A009 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.65■■■□□ 2.02
Ltn1Q6A009 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Ltn1Q6A009 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.65■■■□□ 2.02
Ltn1Q6A009 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC27.64■■■□□ 2.02
Ltn1Q6A009 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC27.63■■■□□ 2.01
Ltn1Q6A009 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Ltn1Q6A009 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.63■■■□□ 2.01
Ltn1Q6A009 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ltn1Q6A009 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Ltn1Q6A009 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.63■■■□□ 2.01
Ltn1Q6A009 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Ltn1Q6A009 Gm13238-201ENSMUST00000117655 780 ntBASIC27.6■■■□□ 2.01
Ltn1Q6A009 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC27.6■■■□□ 2.01
Ltn1Q6A009 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ltn1Q6A009 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Ltn1Q6A009 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC27.58■■■□□ 2.01
Ltn1Q6A009 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC27.58■■■□□ 2
Ltn1Q6A009 Gm15820-201ENSMUST00000201566 728 ntBASIC27.58■■■□□ 2
Ltn1Q6A009 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.58■■■□□ 2
Ltn1Q6A009 Gm45444-201ENSMUST00000211394 898 ntBASIC27.57■■■□□ 2
Ltn1Q6A009 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Ltn1Q6A009 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ltn1Q6A009 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.55■■■□□ 2
Ltn1Q6A009 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC27.55■■■□□ 2
Ltn1Q6A009 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Ltn1Q6A009 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Ltn1Q6A009 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.53■■■□□ 2
Ltn1Q6A009 AC093043.1-201ENSMUST00000226700 898 ntBASIC27.53■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms