Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr1Q64729 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Tgfbr1Q64729 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Tgfbr1Q64729 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr1Q64729 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr1Q64729 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr1Q64729 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Tgfbr1Q64729 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Tgfbr1Q64729 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr1Q64729 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr1Q64729 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr1Q64729 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr1Q64729 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr1Q64729 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr1Q64729 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr1Q64729 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Tgfbr1Q64729 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr1Q64729 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tgfbr1Q64729 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tgfbr1Q64729 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr1Q64729 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr1Q64729 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Tgfbr1Q64729 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tgfbr1Q64729 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tgfbr1Q64729 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Tgfbr1Q64729 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr1Q64729 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr1Q64729 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tgfbr1Q64729 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Tgfbr1Q64729 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr1Q64729 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr1Q64729 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr1Q64729 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tgfbr1Q64729 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.38■□□□□ 0.53
Tgfbr1Q64729 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr1Q64729 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.38■□□□□ 0.53
Tgfbr1Q64729 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr1Q64729 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr1Q64729 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tgfbr1Q64729 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tgfbr1Q64729 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tgfbr1Q64729 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tgfbr1Q64729 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tgfbr1Q64729 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tgfbr1Q64729 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr1Q64729 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr1Q64729 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tgfbr1Q64729 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr1Q64729 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
Tgfbr1Q64729 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tgfbr1Q64729 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tgfbr1Q64729 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tgfbr1Q64729 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tgfbr1Q64729 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tgfbr1Q64729 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tgfbr1Q64729 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.32■□□□□ 0.52
Tgfbr1Q64729 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tgfbr1Q64729 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tgfbr1Q64729 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr1Q64729 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.31■□□□□ 0.52
Tgfbr1Q64729 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr1Q64729 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr1Q64729 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr1Q64729 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr1Q64729 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.3■□□□□ 0.52
Tgfbr1Q64729 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr1Q64729 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr1Q64729 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.3■□□□□ 0.52
Tgfbr1Q64729 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr1Q64729 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.3■□□□□ 0.52
Tgfbr1Q64729 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tgfbr1Q64729 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr1Q64729 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.29■□□□□ 0.52
Tgfbr1Q64729 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tgfbr1Q64729 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms