Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sox16Q62247 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sox16Q62247 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox16Q62247 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox16Q62247 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox16Q62247 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox16Q62247 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox16Q62247 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox16Q62247 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox16Q62247 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox16Q62247 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox16Q62247 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC13.19□□□□□ -0.3
Sox16Q62247 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox16Q62247 Dmtn-209ENSMUST00000228295 2572 ntBASIC13.19□□□□□ -0.3
Sox16Q62247 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox16Q62247 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Sox16Q62247 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox16Q62247 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC13.18□□□□□ -0.3
Sox16Q62247 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sox16Q62247 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox16Q62247 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox16Q62247 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC13.17□□□□□ -0.3
Sox16Q62247 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.17□□□□□ -0.3
Sox16Q62247 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox16Q62247 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sox16Q62247 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sox16Q62247 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox16Q62247 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox16Q62247 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox16Q62247 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Sox16Q62247 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox16Q62247 Gm15043-201ENSMUST00000118843 1543 ntBASIC13.16□□□□□ -0.3
Sox16Q62247 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox16Q62247 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox16Q62247 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sox16Q62247 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sox16Q62247 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sox16Q62247 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sox16Q62247 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox16Q62247 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC13.15□□□□□ -0.3
Sox16Q62247 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Sox16Q62247 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sox16Q62247 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox16Q62247 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sox16Q62247 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox16Q62247 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC13.15□□□□□ -0.3
Sox16Q62247 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sox16Q62247 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sox16Q62247 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Sox16Q62247 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Sox16Q62247 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Sox16Q62247 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox16Q62247 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox16Q62247 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox16Q62247 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox16Q62247 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox16Q62247 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Sox16Q62247 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Sox16Q62247 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Sox16Q62247 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox16Q62247 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox16Q62247 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Sox16Q62247 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Sox16Q62247 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
Sox16Q62247 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox16Q62247 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox16Q62247 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox16Q62247 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox16Q62247 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox16Q62247 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox16Q62247 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox16Q62247 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox16Q62247 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox16Q62247 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC13.11□□□□□ -0.31
Sox16Q62247 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox16Q62247 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox16Q62247 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox16Q62247 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox16Q62247 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox16Q62247 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox16Q62247 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox16Q62247 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox16Q62247 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox16Q62247 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox16Q62247 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox16Q62247 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox16Q62247 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox16Q62247 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sox16Q62247 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox16Q62247 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox16Q62247 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sox16Q62247 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox16Q62247 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sox16Q62247 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Sox16Q62247 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox16Q62247 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sox16Q62247 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox16Q62247 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox16Q62247 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sox16Q62247 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms