Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd3Q61060 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Foxd3Q61060 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Foxd3Q61060 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd3Q61060 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.66■□□□□ 0.9
Foxd3Q61060 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd3Q61060 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Foxd3Q61060 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Foxd3Q61060 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Foxd3Q61060 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd3Q61060 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd3Q61060 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd3Q61060 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Foxd3Q61060 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Foxd3Q61060 Gm11175-201ENSMUST00000116172 543 ntBASIC20.64■□□□□ 0.89
Foxd3Q61060 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd3Q61060 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Foxd3Q61060 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd3Q61060 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Foxd3Q61060 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Foxd3Q61060 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Foxd3Q61060 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd3Q61060 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd3Q61060 Gm11599-201ENSMUST00000118720 878 ntBASIC20.62■□□□□ 0.89
Foxd3Q61060 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd3Q61060 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd3Q61060 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd3Q61060 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Foxd3Q61060 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Foxd3Q61060 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd3Q61060 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd3Q61060 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd3Q61060 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd3Q61060 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd3Q61060 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Foxd3Q61060 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Foxd3Q61060 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Foxd3Q61060 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Foxd3Q61060 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Foxd3Q61060 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Foxd3Q61060 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Foxd3Q61060 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxd3Q61060 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxd3Q61060 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Foxd3Q61060 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Foxd3Q61060 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Foxd3Q61060 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxd3Q61060 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxd3Q61060 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxd3Q61060 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Foxd3Q61060 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxd3Q61060 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxd3Q61060 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Foxd3Q61060 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.56■□□□□ 0.88
Foxd3Q61060 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Foxd3Q61060 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.56■□□□□ 0.88
Foxd3Q61060 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.56■□□□□ 0.88
Foxd3Q61060 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Foxd3Q61060 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Foxd3Q61060 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Foxd3Q61060 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxd3Q61060 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Foxd3Q61060 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxd3Q61060 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxd3Q61060 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Foxd3Q61060 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Foxd3Q61060 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxd3Q61060 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Foxd3Q61060 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxd3Q61060 Mir6538-201ENSMUST00000183713 110 ntBASIC20.53■□□□□ 0.88
Foxd3Q61060 Gm37136-201ENSMUST00000194368 194 ntBASIC20.53■□□□□ 0.88
Foxd3Q61060 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.53■□□□□ 0.88
Foxd3Q61060 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxd3Q61060 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Foxd3Q61060 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Foxd3Q61060 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.52■□□□□ 0.88
Foxd3Q61060 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Foxd3Q61060 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Foxd3Q61060 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.52■□□□□ 0.87
Foxd3Q61060 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Foxd3Q61060 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxd3Q61060 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxd3Q61060 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.51■□□□□ 0.87
Foxd3Q61060 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.51■□□□□ 0.87
Foxd3Q61060 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.51■□□□□ 0.87
Foxd3Q61060 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxd3Q61060 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxd3Q61060 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Foxd3Q61060 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Foxd3Q61060 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxd3Q61060 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Foxd3Q61060 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxd3Q61060 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxd3Q61060 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Foxd3Q61060 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxd3Q61060 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Foxd3Q61060 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Foxd3Q61060 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Foxd3Q61060 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Foxd3Q61060 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms