Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lrrk2Q5S006 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrk2Q5S006 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.61■□□□□ 0.89
Lrrk2Q5S006 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrk2Q5S006 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrk2Q5S006 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lrrk2Q5S006 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.61■□□□□ 0.89
Lrrk2Q5S006 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lrrk2Q5S006 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Lrrk2Q5S006 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrk2Q5S006 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrk2Q5S006 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lrrk2Q5S006 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Lrrk2Q5S006 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.58■□□□□ 0.89
Lrrk2Q5S006 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrrk2Q5S006 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lrrk2Q5S006 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrk2Q5S006 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lrrk2Q5S006 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrk2Q5S006 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lrrk2Q5S006 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.56■□□□□ 0.88
Lrrk2Q5S006 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Lrrk2Q5S006 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.55■□□□□ 0.88
Lrrk2Q5S006 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.55■□□□□ 0.88
Lrrk2Q5S006 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrk2Q5S006 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.55■□□□□ 0.88
Lrrk2Q5S006 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrk2Q5S006 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrk2Q5S006 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Lrrk2Q5S006 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Lrrk2Q5S006 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lrrk2Q5S006 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Lrrk2Q5S006 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.53■□□□□ 0.88
Lrrk2Q5S006 Terc-201ENSMUST00000082862 423 ntBASIC20.53■□□□□ 0.88
Lrrk2Q5S006 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Lrrk2Q5S006 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.52■□□□□ 0.87
Lrrk2Q5S006 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.52■□□□□ 0.87
Lrrk2Q5S006 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk2Q5S006 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk2Q5S006 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk2Q5S006 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk2Q5S006 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Lrrk2Q5S006 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Lrrk2Q5S006 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrk2Q5S006 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Lrrk2Q5S006 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.5■□□□□ 0.87
Lrrk2Q5S006 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrk2Q5S006 Gm10232-201ENSMUST00000089221 720 ntBASIC20.49■□□□□ 0.87
Lrrk2Q5S006 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrk2Q5S006 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Lrrk2Q5S006 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrk2Q5S006 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Lrrk2Q5S006 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Lrrk2Q5S006 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrk2Q5S006 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrk2Q5S006 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
Lrrk2Q5S006 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrk2Q5S006 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.48■□□□□ 0.87
Lrrk2Q5S006 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.48■□□□□ 0.87
Lrrk2Q5S006 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrrk2Q5S006 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.48■□□□□ 0.87
Lrrk2Q5S006 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrk2Q5S006 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.47■□□□□ 0.87
Lrrk2Q5S006 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrk2Q5S006 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrk2Q5S006 Gm13241-201ENSMUST00000094493 780 ntBASIC20.47■□□□□ 0.87
Lrrk2Q5S006 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrk2Q5S006 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrrk2Q5S006 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrk2Q5S006 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lrrk2Q5S006 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrk2Q5S006 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrk2Q5S006 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrrk2Q5S006 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrk2Q5S006 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.45■□□□□ 0.86
Lrrk2Q5S006 Gm21956-201ENSMUST00000179946 522 ntBASIC20.45■□□□□ 0.86
Lrrk2Q5S006 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrrk2Q5S006 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Lrrk2Q5S006 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.45■□□□□ 0.86
Lrrk2Q5S006 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrk2Q5S006 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lrrk2Q5S006 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.44■□□□□ 0.86
Lrrk2Q5S006 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrk2Q5S006 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Lrrk2Q5S006 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrk2Q5S006 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrrk2Q5S006 Etf1-202ENSMUST00000180351 108 ntBASIC20.42■□□□□ 0.86
Lrrk2Q5S006 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrrk2Q5S006 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrk2Q5S006 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrk2Q5S006 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
Lrrk2Q5S006 Gm44428-201ENSMUST00000204474 874 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms