Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7d-4Q5R1H9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7d-4Q5R1H9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7d-4Q5R1H9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7d-4Q5R1H9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Trav7d-4Q5R1H9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7d-4Q5R1H9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7d-4Q5R1H9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav7d-4Q5R1H9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7d-4Q5R1H9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7d-4Q5R1H9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7d-4Q5R1H9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7d-4Q5R1H9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav7d-4Q5R1H9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7d-4Q5R1H9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trav7d-4Q5R1H9 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.36■□□□□ 0.37
Trav7d-4Q5R1H9 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.36■□□□□ 0.37
Trav7d-4Q5R1H9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav7d-4Q5R1H9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav7d-4Q5R1H9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7d-4Q5R1H9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trav7d-4Q5R1H9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav7d-4Q5R1H9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav7d-4Q5R1H9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trav7d-4Q5R1H9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.33■□□□□ 0.36
Trav7d-4Q5R1H9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7d-4Q5R1H9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7d-4Q5R1H9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav7d-4Q5R1H9 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7d-4Q5R1H9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7d-4Q5R1H9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7d-4Q5R1H9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7d-4Q5R1H9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7d-4Q5R1H9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7d-4Q5R1H9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav7d-4Q5R1H9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Particl-201ENSMUST00000205370 1560 ntBASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav7d-4Q5R1H9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7d-4Q5R1H9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7d-4Q5R1H9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7d-4Q5R1H9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav7d-4Q5R1H9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7d-4Q5R1H9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7d-4Q5R1H9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7d-4Q5R1H9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav7d-4Q5R1H9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trav7d-4Q5R1H9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav7d-4Q5R1H9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7d-4Q5R1H9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7d-4Q5R1H9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7d-4Q5R1H9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7d-4Q5R1H9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7d-4Q5R1H9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav7d-4Q5R1H9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7d-4Q5R1H9 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.27■□□□□ 0.36
Trav7d-4Q5R1H9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7d-4Q5R1H9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav7d-4Q5R1H9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav7d-4Q5R1H9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7d-4Q5R1H9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7d-4Q5R1H9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav7d-4Q5R1H9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav7d-4Q5R1H9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7d-4Q5R1H9 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7d-4Q5R1H9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7d-4Q5R1H9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7d-4Q5R1H9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav7d-4Q5R1H9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav7d-4Q5R1H9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7d-4Q5R1H9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Trav7d-4Q5R1H9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7d-4Q5R1H9 Gm26115-201ENSMUST00000175605 87 ntBASIC17.23■□□□□ 0.35
Trav7d-4Q5R1H9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7d-4Q5R1H9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7d-4Q5R1H9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav7d-4Q5R1H9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms