Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.48■□□□□ 0.71
Trav5d-4Q5R1F6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trav5d-4Q5R1F6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.47■□□□□ 0.71
Trav5d-4Q5R1F6 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.47■□□□□ 0.71
Trav5d-4Q5R1F6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav5d-4Q5R1F6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trav5d-4Q5R1F6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav5d-4Q5R1F6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav5d-4Q5R1F6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav5d-4Q5R1F6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trav5d-4Q5R1F6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav5d-4Q5R1F6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trav5d-4Q5R1F6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav5d-4Q5R1F6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav5d-4Q5R1F6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trav5d-4Q5R1F6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trav5d-4Q5R1F6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav5d-4Q5R1F6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav5d-4Q5R1F6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav5d-4Q5R1F6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.43■□□□□ 0.7
Trav5d-4Q5R1F6 Gm7432-201ENSMUST00000210343 879 ntBASIC19.43■□□□□ 0.7
Trav5d-4Q5R1F6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav5d-4Q5R1F6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav5d-4Q5R1F6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Trav5d-4Q5R1F6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav5d-4Q5R1F6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav5d-4Q5R1F6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav5d-4Q5R1F6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav5d-4Q5R1F6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav5d-4Q5R1F6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav5d-4Q5R1F6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5d-4Q5R1F6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5d-4Q5R1F6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5d-4Q5R1F6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav5d-4Q5R1F6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav5d-4Q5R1F6 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav5d-4Q5R1F6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.4■□□□□ 0.7
Trav5d-4Q5R1F6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav5d-4Q5R1F6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trav5d-4Q5R1F6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5d-4Q5R1F6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5d-4Q5R1F6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav5d-4Q5R1F6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5d-4Q5R1F6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5d-4Q5R1F6 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.39■□□□□ 0.69
Trav5d-4Q5R1F6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5d-4Q5R1F6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav5d-4Q5R1F6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav5d-4Q5R1F6 Gm4799-201ENSMUST00000095396 657 ntBASIC19.38■□□□□ 0.69
Trav5d-4Q5R1F6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5d-4Q5R1F6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5d-4Q5R1F6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.37■□□□□ 0.69
Trav5d-4Q5R1F6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5d-4Q5R1F6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5d-4Q5R1F6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5d-4Q5R1F6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5d-4Q5R1F6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav5d-4Q5R1F6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav5d-4Q5R1F6 Gm11599-201ENSMUST00000118720 878 ntBASIC19.36■□□□□ 0.69
Trav5d-4Q5R1F6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav5d-4Q5R1F6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav5d-4Q5R1F6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav5d-4Q5R1F6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav5d-4Q5R1F6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.34■□□□□ 0.69
Trav5d-4Q5R1F6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.34■□□□□ 0.69
Trav5d-4Q5R1F6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav5d-4Q5R1F6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Trav5d-4Q5R1F6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav5d-4Q5R1F6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Trav5d-4Q5R1F6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav5d-4Q5R1F6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav5d-4Q5R1F6 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.32■□□□□ 0.68
Trav5d-4Q5R1F6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav5d-4Q5R1F6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav5d-4Q5R1F6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav5d-4Q5R1F6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav5d-4Q5R1F6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav5d-4Q5R1F6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav5d-4Q5R1F6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Trav5d-4Q5R1F6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav5d-4Q5R1F6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav5d-4Q5R1F6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav5d-4Q5R1F6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav5d-4Q5R1F6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav5d-4Q5R1F6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav5d-4Q5R1F6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Trav5d-4Q5R1F6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav5d-4Q5R1F6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.28■□□□□ 0.68
Trav5d-4Q5R1F6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trav5d-4Q5R1F6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.28■□□□□ 0.68
Trav5d-4Q5R1F6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav5d-4Q5R1F6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms