Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Rnf43Q5NCP0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf43Q5NCP0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf43Q5NCP0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf43Q5NCP0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Rnf43Q5NCP0 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.35■■□□□ 1.33
Rnf43Q5NCP0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf43Q5NCP0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf43Q5NCP0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.35■■□□□ 1.33
Rnf43Q5NCP0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.35■■□□□ 1.33
Rnf43Q5NCP0 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.35■■□□□ 1.33
Rnf43Q5NCP0 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.35■■□□□ 1.33
Rnf43Q5NCP0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf43Q5NCP0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Rnf43Q5NCP0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf43Q5NCP0 Gm15546-201ENSMUST00000122095 826 ntBASIC23.34■■□□□ 1.33
Rnf43Q5NCP0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf43Q5NCP0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf43Q5NCP0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf43Q5NCP0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rnf43Q5NCP0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf43Q5NCP0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf43Q5NCP0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rnf43Q5NCP0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.33■■□□□ 1.32
Rnf43Q5NCP0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Rnf43Q5NCP0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rnf43Q5NCP0 Gm44428-201ENSMUST00000204474 874 ntBASIC23.32■■□□□ 1.32
Rnf43Q5NCP0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Rnf43Q5NCP0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.32■■□□□ 1.32
Rnf43Q5NCP0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf43Q5NCP0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf43Q5NCP0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf43Q5NCP0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Rnf43Q5NCP0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.3■■□□□ 1.32
Rnf43Q5NCP0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf43Q5NCP0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.3■■□□□ 1.32
Rnf43Q5NCP0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.29■■□□□ 1.32
Rnf43Q5NCP0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Rnf43Q5NCP0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf43Q5NCP0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf43Q5NCP0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.28■■□□□ 1.32
Rnf43Q5NCP0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf43Q5NCP0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf43Q5NCP0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf43Q5NCP0 Gm15039-201ENSMUST00000118914 875 ntBASIC23.27■■□□□ 1.32
Rnf43Q5NCP0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf43Q5NCP0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf43Q5NCP0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf43Q5NCP0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf43Q5NCP0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf43Q5NCP0 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.25■■□□□ 1.31
Rnf43Q5NCP0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf43Q5NCP0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rnf43Q5NCP0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rnf43Q5NCP0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf43Q5NCP0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.23■■□□□ 1.31
Rnf43Q5NCP0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Rnf43Q5NCP0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf43Q5NCP0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf43Q5NCP0 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Rnf43Q5NCP0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rnf43Q5NCP0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf43Q5NCP0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.21■■□□□ 1.31
Rnf43Q5NCP0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf43Q5NCP0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf43Q5NCP0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
Rnf43Q5NCP0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf43Q5NCP0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf43Q5NCP0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Rnf43Q5NCP0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf43Q5NCP0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf43Q5NCP0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.19■■□□□ 1.3
Rnf43Q5NCP0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf43Q5NCP0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf43Q5NCP0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.18■■□□□ 1.3
Rnf43Q5NCP0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf43Q5NCP0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf43Q5NCP0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf43Q5NCP0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf43Q5NCP0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf43Q5NCP0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf43Q5NCP0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf43Q5NCP0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.16■■□□□ 1.3
Rnf43Q5NCP0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf43Q5NCP0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf43Q5NCP0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.15■■□□□ 1.3
Rnf43Q5NCP0 Gm43566-201ENSMUST00000196851 808 ntBASIC23.15■■□□□ 1.3
Rnf43Q5NCP0 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.15■■□□□ 1.3
Rnf43Q5NCP0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf43Q5NCP0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf43Q5NCP0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
Rnf43Q5NCP0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf43Q5NCP0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.14■■□□□ 1.29
Rnf43Q5NCP0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.14■■□□□ 1.29
Rnf43Q5NCP0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Rnf43Q5NCP0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf43Q5NCP0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf43Q5NCP0 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.13■■□□□ 1.29
Rnf43Q5NCP0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf43Q5NCP0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms