Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Naf1Q3UMQ8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Naf1Q3UMQ8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Naf1Q3UMQ8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Naf1Q3UMQ8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.2■■□□□ 1.3
Naf1Q3UMQ8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Naf1Q3UMQ8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.19■■□□□ 1.3
Naf1Q3UMQ8 Gm14523-201ENSMUST00000117260 558 ntBASIC23.19■■□□□ 1.3
Naf1Q3UMQ8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.19■■□□□ 1.3
Naf1Q3UMQ8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Naf1Q3UMQ8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Naf1Q3UMQ8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
Naf1Q3UMQ8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Naf1Q3UMQ8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Naf1Q3UMQ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Naf1Q3UMQ8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Naf1Q3UMQ8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Naf1Q3UMQ8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.17■■□□□ 1.3
Naf1Q3UMQ8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Naf1Q3UMQ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.16■■□□□ 1.3
Naf1Q3UMQ8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Naf1Q3UMQ8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Naf1Q3UMQ8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.15■■□□□ 1.3
Naf1Q3UMQ8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Naf1Q3UMQ8 Gm7332-201ENSMUST00000118351 454 ntBASIC23.15■■□□□ 1.3
Naf1Q3UMQ8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Naf1Q3UMQ8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Naf1Q3UMQ8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Naf1Q3UMQ8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Naf1Q3UMQ8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.14■■□□□ 1.29
Naf1Q3UMQ8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Naf1Q3UMQ8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Naf1Q3UMQ8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Naf1Q3UMQ8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Naf1Q3UMQ8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Naf1Q3UMQ8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Naf1Q3UMQ8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Naf1Q3UMQ8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Naf1Q3UMQ8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Naf1Q3UMQ8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Naf1Q3UMQ8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Naf1Q3UMQ8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Naf1Q3UMQ8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Naf1Q3UMQ8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Naf1Q3UMQ8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Naf1Q3UMQ8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Naf1Q3UMQ8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Naf1Q3UMQ8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Naf1Q3UMQ8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Naf1Q3UMQ8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Naf1Q3UMQ8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Naf1Q3UMQ8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Naf1Q3UMQ8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Naf1Q3UMQ8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Naf1Q3UMQ8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Naf1Q3UMQ8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Naf1Q3UMQ8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Naf1Q3UMQ8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Naf1Q3UMQ8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.07■■□□□ 1.28
Naf1Q3UMQ8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.07■■□□□ 1.28
Naf1Q3UMQ8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.07■■□□□ 1.28
Naf1Q3UMQ8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Naf1Q3UMQ8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Naf1Q3UMQ8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Naf1Q3UMQ8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Naf1Q3UMQ8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Naf1Q3UMQ8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Naf1Q3UMQ8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Naf1Q3UMQ8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Naf1Q3UMQ8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.05■■□□□ 1.28
Naf1Q3UMQ8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.05■■□□□ 1.28
Naf1Q3UMQ8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Naf1Q3UMQ8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Naf1Q3UMQ8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Naf1Q3UMQ8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Naf1Q3UMQ8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Naf1Q3UMQ8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.04■■□□□ 1.28
Naf1Q3UMQ8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Naf1Q3UMQ8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.03■■□□□ 1.28
Naf1Q3UMQ8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Naf1Q3UMQ8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Naf1Q3UMQ8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Naf1Q3UMQ8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Naf1Q3UMQ8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Naf1Q3UMQ8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Naf1Q3UMQ8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Naf1Q3UMQ8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Naf1Q3UMQ8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Naf1Q3UMQ8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Naf1Q3UMQ8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Naf1Q3UMQ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
Naf1Q3UMQ8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23■■□□□ 1.27
Naf1Q3UMQ8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Naf1Q3UMQ8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Naf1Q3UMQ8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Naf1Q3UMQ8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Naf1Q3UMQ8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.99■■□□□ 1.27
Naf1Q3UMQ8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Naf1Q3UMQ8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Naf1Q3UMQ8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms