Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Tnrc6aQ3UHK8 Gm5921-201ENSMUST00000075898 882 ntBASIC21.52■■□□□ 1.03
Tnrc6aQ3UHK8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tnrc6aQ3UHK8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tnrc6aQ3UHK8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tnrc6aQ3UHK8 Gm5812-201ENSMUST00000061073 957 ntBASIC21.51■■□□□ 1.03
Tnrc6aQ3UHK8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnrc6aQ3UHK8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tnrc6aQ3UHK8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.5■■□□□ 1.03
Tnrc6aQ3UHK8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Tnrc6aQ3UHK8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Tnrc6aQ3UHK8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnrc6aQ3UHK8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnrc6aQ3UHK8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tnrc6aQ3UHK8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tnrc6aQ3UHK8 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.48■■□□□ 1.03
Tnrc6aQ3UHK8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.48■■□□□ 1.03
Tnrc6aQ3UHK8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnrc6aQ3UHK8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnrc6aQ3UHK8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnrc6aQ3UHK8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnrc6aQ3UHK8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.47■■□□□ 1.03
Tnrc6aQ3UHK8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tnrc6aQ3UHK8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnrc6aQ3UHK8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Tnrc6aQ3UHK8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnrc6aQ3UHK8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.43■■□□□ 1.02
Tnrc6aQ3UHK8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnrc6aQ3UHK8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Tnrc6aQ3UHK8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnrc6aQ3UHK8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Tnrc6aQ3UHK8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnrc6aQ3UHK8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnrc6aQ3UHK8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.42■■□□□ 1.02
Tnrc6aQ3UHK8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc6aQ3UHK8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc6aQ3UHK8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc6aQ3UHK8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc6aQ3UHK8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc6aQ3UHK8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Tnrc6aQ3UHK8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc6aQ3UHK8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc6aQ3UHK8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc6aQ3UHK8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.39■■□□□ 1.02
Tnrc6aQ3UHK8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tnrc6aQ3UHK8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc6aQ3UHK8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc6aQ3UHK8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc6aQ3UHK8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc6aQ3UHK8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc6aQ3UHK8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.38■■□□□ 1.01
Tnrc6aQ3UHK8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Tnrc6aQ3UHK8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Tnrc6aQ3UHK8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Tnrc6aQ3UHK8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.38■■□□□ 1.01
Tnrc6aQ3UHK8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnrc6aQ3UHK8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnrc6aQ3UHK8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnrc6aQ3UHK8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.36■■□□□ 1.01
Tnrc6aQ3UHK8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.35■■□□□ 1.01
Tnrc6aQ3UHK8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnrc6aQ3UHK8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tnrc6aQ3UHK8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnrc6aQ3UHK8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnrc6aQ3UHK8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tnrc6aQ3UHK8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.34■■□□□ 1.01
Tnrc6aQ3UHK8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tnrc6aQ3UHK8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnrc6aQ3UHK8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Tnrc6aQ3UHK8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tnrc6aQ3UHK8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6aQ3UHK8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.32■■□□□ 1
Tnrc6aQ3UHK8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc6aQ3UHK8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6aQ3UHK8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6aQ3UHK8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6aQ3UHK8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc6aQ3UHK8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Gm44428-201ENSMUST00000204474 874 ntBASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc6aQ3UHK8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Tnrc6aQ3UHK8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.29■■□□□ 1
Tnrc6aQ3UHK8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6aQ3UHK8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc6aQ3UHK8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Tnrc6aQ3UHK8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tnrc6aQ3UHK8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Tnrc6aQ3UHK8 Gm22567-201ENSMUST00000175542 342 ntBASIC21.27■■□□□ 1
Tnrc6aQ3UHK8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnrc6aQ3UHK8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.27■□□□□ 0.99
Tnrc6aQ3UHK8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.27■□□□□ 0.99
Tnrc6aQ3UHK8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.26■□□□□ 0.99
Tnrc6aQ3UHK8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms