Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col5a2Q3U962 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.97■■■□□ 2.07
Col5a2Q3U962 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Col5a2Q3U962 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.96■■■□□ 2.07
Col5a2Q3U962 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Col5a2Q3U962 Gm43592-201ENSMUST00000196922 1165 ntBASIC27.95■■■□□ 2.07
Col5a2Q3U962 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.95■■■□□ 2.07
Col5a2Q3U962 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Col5a2Q3U962 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.95■■■□□ 2.07
Col5a2Q3U962 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Col5a2Q3U962 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Col5a2Q3U962 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC27.94■■■□□ 2.06
Col5a2Q3U962 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Col5a2Q3U962 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Col5a2Q3U962 Gm44428-201ENSMUST00000204474 874 ntBASIC27.93■■■□□ 2.06
Col5a2Q3U962 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC27.93■■■□□ 2.06
Col5a2Q3U962 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Col5a2Q3U962 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.92■■■□□ 2.06
Col5a2Q3U962 Gm15820-201ENSMUST00000201566 728 ntBASIC27.92■■■□□ 2.06
Col5a2Q3U962 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC27.91■■■□□ 2.06
Col5a2Q3U962 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Col5a2Q3U962 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Col5a2Q3U962 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC27.89■■■□□ 2.06
Col5a2Q3U962 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC27.89■■■□□ 2.06
Col5a2Q3U962 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Col5a2Q3U962 Gm14117-201ENSMUST00000122417 843 ntBASIC27.89■■■□□ 2.05
Col5a2Q3U962 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.05
Col5a2Q3U962 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col5a2Q3U962 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col5a2Q3U962 Nsd1-203ENSMUST00000224156 1149 ntBASIC27.88■■■□□ 2.05
Col5a2Q3U962 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col5a2Q3U962 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
Col5a2Q3U962 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Col5a2Q3U962 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC27.86■■■□□ 2.05
Col5a2Q3U962 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Col5a2Q3U962 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Col5a2Q3U962 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col5a2Q3U962 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col5a2Q3U962 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Col5a2Q3U962 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Col5a2Q3U962 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Col5a2Q3U962 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Col5a2Q3U962 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Col5a2Q3U962 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
Col5a2Q3U962 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC27.82■■■□□ 2.04
Col5a2Q3U962 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Col5a2Q3U962 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col5a2Q3U962 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Col5a2Q3U962 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Col5a2Q3U962 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Col5a2Q3U962 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col5a2Q3U962 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Col5a2Q3U962 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
Col5a2Q3U962 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Col5a2Q3U962 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC27.79■■■□□ 2.04
Col5a2Q3U962 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.79■■■□□ 2.04
Col5a2Q3U962 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.78■■■□□ 2.04
Col5a2Q3U962 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Col5a2Q3U962 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Col5a2Q3U962 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
Col5a2Q3U962 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Col5a2Q3U962 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Col5a2Q3U962 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Col5a2Q3U962 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Col5a2Q3U962 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
Col5a2Q3U962 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC27.76■■■□□ 2.04
Col5a2Q3U962 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC27.75■■■□□ 2.03
Col5a2Q3U962 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Col5a2Q3U962 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC27.75■■■□□ 2.03
Col5a2Q3U962 Gm9959-201ENSMUST00000068277 390 ntBASIC27.75■■■□□ 2.03
Col5a2Q3U962 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Col5a2Q3U962 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Col5a2Q3U962 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Col5a2Q3U962 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Col5a2Q3U962 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC27.74■■■□□ 2.03
Col5a2Q3U962 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col5a2Q3U962 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col5a2Q3U962 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Col5a2Q3U962 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Col5a2Q3U962 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC27.72■■■□□ 2.03
Col5a2Q3U962 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC27.72■■■□□ 2.03
Col5a2Q3U962 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col5a2Q3U962 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Col5a2Q3U962 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
Col5a2Q3U962 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
Col5a2Q3U962 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Col5a2Q3U962 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC27.7■■■□□ 2.03
Col5a2Q3U962 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Col5a2Q3U962 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.7■■■□□ 2.02
Col5a2Q3U962 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.69■■■□□ 2.02
Col5a2Q3U962 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC27.69■■■□□ 2.02
Col5a2Q3U962 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC27.68■■■□□ 2.02
Col5a2Q3U962 Gm42501-201ENSMUST00000200220 1026 ntBASIC27.68■■■□□ 2.02
Col5a2Q3U962 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Col5a2Q3U962 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Col5a2Q3U962 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Col5a2Q3U962 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
Col5a2Q3U962 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
Col5a2Q3U962 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC27.67■■■□□ 2.02
Col5a2Q3U962 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms