Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Ptchd3Q0EEE2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd3Q0EEE2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ptchd3Q0EEE2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd3Q0EEE2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd3Q0EEE2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ptchd3Q0EEE2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ptchd3Q0EEE2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd3Q0EEE2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd3Q0EEE2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.84■■□□□ 1.09
Ptchd3Q0EEE2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd3Q0EEE2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ptchd3Q0EEE2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ptchd3Q0EEE2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.83■■□□□ 1.09
Ptchd3Q0EEE2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.83■■□□□ 1.09
Ptchd3Q0EEE2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ptchd3Q0EEE2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ptchd3Q0EEE2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptchd3Q0EEE2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ptchd3Q0EEE2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptchd3Q0EEE2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ptchd3Q0EEE2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd3Q0EEE2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Ptchd3Q0EEE2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ptchd3Q0EEE2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ptchd3Q0EEE2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptchd3Q0EEE2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptchd3Q0EEE2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ptchd3Q0EEE2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.8■■□□□ 1.08
Ptchd3Q0EEE2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptchd3Q0EEE2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ptchd3Q0EEE2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ptchd3Q0EEE2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptchd3Q0EEE2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptchd3Q0EEE2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd3Q0EEE2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd3Q0EEE2 Nkain2-201ENSMUST00000092602 558 ntBASIC21.77■■□□□ 1.08
Ptchd3Q0EEE2 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd3Q0EEE2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd3Q0EEE2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptchd3Q0EEE2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ptchd3Q0EEE2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Particl-201ENSMUST00000205370 1560 ntBASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptchd3Q0EEE2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptchd3Q0EEE2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptchd3Q0EEE2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.74■■□□□ 1.07
Ptchd3Q0EEE2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptchd3Q0EEE2 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.74■■□□□ 1.07
Ptchd3Q0EEE2 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptchd3Q0EEE2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ptchd3Q0EEE2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptchd3Q0EEE2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptchd3Q0EEE2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptchd3Q0EEE2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptchd3Q0EEE2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptchd3Q0EEE2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptchd3Q0EEE2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptchd3Q0EEE2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptchd3Q0EEE2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Ptchd3Q0EEE2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ptchd3Q0EEE2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ptchd3Q0EEE2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ptchd3Q0EEE2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ptchd3Q0EEE2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.71■■□□□ 1.07
Ptchd3Q0EEE2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ptchd3Q0EEE2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
Ptchd3Q0EEE2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ptchd3Q0EEE2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ptchd3Q0EEE2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ptchd3Q0EEE2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Ptchd3Q0EEE2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptchd3Q0EEE2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ptchd3Q0EEE2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ptchd3Q0EEE2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ptchd3Q0EEE2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ptchd3Q0EEE2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ptchd3Q0EEE2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.67■■□□□ 1.06
Ptchd3Q0EEE2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ptchd3Q0EEE2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.67■■□□□ 1.06
Ptchd3Q0EEE2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Ptchd3Q0EEE2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd3Q0EEE2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd3Q0EEE2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ptchd3Q0EEE2 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms