Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npas1P97459 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.95■□□□□ 0.62
Npas1P97459 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npas1P97459 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Npas1P97459 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Npas1P97459 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Npas1P97459 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Npas1P97459 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.93■□□□□ 0.62
Npas1P97459 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npas1P97459 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npas1P97459 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.93■□□□□ 0.62
Npas1P97459 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Npas1P97459 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Npas1P97459 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Npas1P97459 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Npas1P97459 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Npas1P97459 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Npas1P97459 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npas1P97459 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.92■□□□□ 0.62
Npas1P97459 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npas1P97459 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npas1P97459 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Npas1P97459 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Npas1P97459 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npas1P97459 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npas1P97459 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npas1P97459 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npas1P97459 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Npas1P97459 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npas1P97459 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Npas1P97459 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Npas1P97459 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npas1P97459 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npas1P97459 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Npas1P97459 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Npas1P97459 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npas1P97459 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Npas1P97459 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.89■□□□□ 0.61
Npas1P97459 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Npas1P97459 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Npas1P97459 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Npas1P97459 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npas1P97459 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Npas1P97459 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npas1P97459 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npas1P97459 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Npas1P97459 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Npas1P97459 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npas1P97459 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npas1P97459 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Npas1P97459 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Npas1P97459 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Npas1P97459 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npas1P97459 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npas1P97459 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Npas1P97459 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Npas1P97459 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Npas1P97459 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.85■□□□□ 0.61
Npas1P97459 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.85■□□□□ 0.61
Npas1P97459 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npas1P97459 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Npas1P97459 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Npas1P97459 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npas1P97459 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.84■□□□□ 0.61
Npas1P97459 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npas1P97459 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npas1P97459 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Npas1P97459 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Npas1P97459 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Npas1P97459 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Npas1P97459 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.83■□□□□ 0.61
Npas1P97459 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npas1P97459 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Npas1P97459 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npas1P97459 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npas1P97459 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npas1P97459 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Npas1P97459 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Npas1P97459 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.82■□□□□ 0.6
Npas1P97459 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.82■□□□□ 0.6
Npas1P97459 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npas1P97459 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Npas1P97459 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Npas1P97459 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas1P97459 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas1P97459 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas1P97459 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Npas1P97459 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas1P97459 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Npas1P97459 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.8■□□□□ 0.6
Npas1P97459 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.8■□□□□ 0.6
Npas1P97459 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas1P97459 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Npas1P97459 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas1P97459 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
Npas1P97459 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas1P97459 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas1P97459 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Npas1P97459 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Npas1P97459 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms