Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PrkdcP97313 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.35■□□□□ 0.21
PrkdcP97313 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PrkdcP97313 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.35■□□□□ 0.21
PrkdcP97313 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PrkdcP97313 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PrkdcP97313 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
PrkdcP97313 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PrkdcP97313 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
PrkdcP97313 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PrkdcP97313 Gm21956-201ENSMUST00000179946 522 ntBASIC16.32■□□□□ 0.2
PrkdcP97313 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.32■□□□□ 0.2
PrkdcP97313 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PrkdcP97313 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PrkdcP97313 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.32■□□□□ 0.2
PrkdcP97313 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PrkdcP97313 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.31■□□□□ 0.2
PrkdcP97313 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.31■□□□□ 0.2
PrkdcP97313 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PrkdcP97313 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrkdcP97313 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrkdcP97313 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrkdcP97313 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PrkdcP97313 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PrkdcP97313 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrkdcP97313 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PrkdcP97313 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PrkdcP97313 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PrkdcP97313 Etf1-202ENSMUST00000180351 108 ntBASIC16.29■□□□□ 0.2
PrkdcP97313 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PrkdcP97313 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.28■□□□□ 0.2
PrkdcP97313 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrkdcP97313 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrkdcP97313 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrkdcP97313 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PrkdcP97313 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrkdcP97313 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.28■□□□□ 0.2
PrkdcP97313 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PrkdcP97313 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PrkdcP97313 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PrkdcP97313 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.27■□□□□ 0.2
PrkdcP97313 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PrkdcP97313 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrkdcP97313 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PrkdcP97313 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrkdcP97313 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrkdcP97313 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrkdcP97313 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrkdcP97313 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PrkdcP97313 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.26■□□□□ 0.19
PrkdcP97313 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.26■□□□□ 0.19
PrkdcP97313 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
PrkdcP97313 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PrkdcP97313 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.25■□□□□ 0.19
PrkdcP97313 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PrkdcP97313 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PrkdcP97313 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PrkdcP97313 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrkdcP97313 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrkdcP97313 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.25■□□□□ 0.19
PrkdcP97313 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrkdcP97313 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.24■□□□□ 0.19
PrkdcP97313 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.24■□□□□ 0.19
PrkdcP97313 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrkdcP97313 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrkdcP97313 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.24■□□□□ 0.19
PrkdcP97313 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PrkdcP97313 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrkdcP97313 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrkdcP97313 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC16.23■□□□□ 0.19
PrkdcP97313 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrkdcP97313 Terc-201ENSMUST00000082862 423 ntBASIC16.23■□□□□ 0.19
PrkdcP97313 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrkdcP97313 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PrkdcP97313 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PrkdcP97313 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PrkdcP97313 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PrkdcP97313 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PrkdcP97313 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PrkdcP97313 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PrkdcP97313 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.21■□□□□ 0.18
PrkdcP97313 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
PrkdcP97313 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PrkdcP97313 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PrkdcP97313 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.2■□□□□ 0.18
PrkdcP97313 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.19■□□□□ 0.18
PrkdcP97313 Gm13241-201ENSMUST00000094493 780 ntBASIC16.19■□□□□ 0.18
PrkdcP97313 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PrkdcP97313 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PrkdcP97313 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PrkdcP97313 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.19■□□□□ 0.18
PrkdcP97313 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PrkdcP97313 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.18■□□□□ 0.18
PrkdcP97313 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrkdcP97313 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.18■□□□□ 0.18
PrkdcP97313 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PrkdcP97313 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.18■□□□□ 0.18
PrkdcP97313 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrkdcP97313 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PrkdcP97313 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms