Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SgcbP82349 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SgcbP82349 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.22■□□□□ 0.83
SgcbP82349 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SgcbP82349 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.21■□□□□ 0.83
SgcbP82349 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SgcbP82349 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SgcbP82349 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SgcbP82349 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SgcbP82349 Gm11175-201ENSMUST00000116172 543 ntBASIC20.2■□□□□ 0.82
SgcbP82349 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SgcbP82349 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SgcbP82349 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SgcbP82349 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SgcbP82349 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
SgcbP82349 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SgcbP82349 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SgcbP82349 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.19■□□□□ 0.82
SgcbP82349 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SgcbP82349 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SgcbP82349 Mir6538-201ENSMUST00000183713 110 ntBASIC20.18■□□□□ 0.82
SgcbP82349 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SgcbP82349 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SgcbP82349 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SgcbP82349 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SgcbP82349 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SgcbP82349 Terc-201ENSMUST00000082862 423 ntBASIC20.17■□□□□ 0.82
SgcbP82349 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.16■□□□□ 0.82
SgcbP82349 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
SgcbP82349 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SgcbP82349 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SgcbP82349 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SgcbP82349 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SgcbP82349 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SgcbP82349 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.15■□□□□ 0.82
SgcbP82349 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SgcbP82349 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SgcbP82349 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SgcbP82349 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SgcbP82349 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SgcbP82349 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SgcbP82349 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SgcbP82349 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SgcbP82349 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SgcbP82349 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SgcbP82349 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.11■□□□□ 0.81
SgcbP82349 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SgcbP82349 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SgcbP82349 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SgcbP82349 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SgcbP82349 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SgcbP82349 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SgcbP82349 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.1■□□□□ 0.81
SgcbP82349 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SgcbP82349 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SgcbP82349 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SgcbP82349 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgcbP82349 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgcbP82349 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgcbP82349 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.09■□□□□ 0.81
SgcbP82349 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SgcbP82349 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SgcbP82349 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SgcbP82349 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.09■□□□□ 0.81
SgcbP82349 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SgcbP82349 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.09■□□□□ 0.81
SgcbP82349 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SgcbP82349 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SgcbP82349 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgcbP82349 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgcbP82349 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SgcbP82349 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SgcbP82349 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
SgcbP82349 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SgcbP82349 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SgcbP82349 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SgcbP82349 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SgcbP82349 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgcbP82349 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgcbP82349 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SgcbP82349 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgcbP82349 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SgcbP82349 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgcbP82349 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgcbP82349 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SgcbP82349 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgcbP82349 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SgcbP82349 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SgcbP82349 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SgcbP82349 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SgcbP82349 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
SgcbP82349 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgcbP82349 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgcbP82349 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SgcbP82349 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SgcbP82349 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgcbP82349 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgcbP82349 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgcbP82349 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgcbP82349 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms