Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ufd1P70362 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.46■□□□□ 0.71
Ufd1P70362 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ufd1P70362 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ufd1P70362 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.46■□□□□ 0.71
Ufd1P70362 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ufd1P70362 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ufd1P70362 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ufd1P70362 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ufd1P70362 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ufd1P70362 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ufd1P70362 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ufd1P70362 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ufd1P70362 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ufd1P70362 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Ufd1P70362 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ufd1P70362 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.43■□□□□ 0.7
Ufd1P70362 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ufd1P70362 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ufd1P70362 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ufd1P70362 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ufd1P70362 Notumos-201ENSMUST00000151998 2659 ntBASIC19.43■□□□□ 0.7
Ufd1P70362 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ufd1P70362 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ufd1P70362 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ufd1P70362 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ufd1P70362 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ufd1P70362 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ufd1P70362 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ufd1P70362 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.41■□□□□ 0.7
Ufd1P70362 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ufd1P70362 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ufd1P70362 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ufd1P70362 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ufd1P70362 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ufd1P70362 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ufd1P70362 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ufd1P70362 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ufd1P70362 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ufd1P70362 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ufd1P70362 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ufd1P70362 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ufd1P70362 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ufd1P70362 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.39■□□□□ 0.69
Ufd1P70362 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.39■□□□□ 0.69
Ufd1P70362 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ufd1P70362 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ufd1P70362 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ufd1P70362 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.38■□□□□ 0.69
Ufd1P70362 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ufd1P70362 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ufd1P70362 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ufd1P70362 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ufd1P70362 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ufd1P70362 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ufd1P70362 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Ufd1P70362 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ufd1P70362 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ufd1P70362 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.36■□□□□ 0.69
Ufd1P70362 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ufd1P70362 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.35■□□□□ 0.69
Ufd1P70362 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ufd1P70362 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ufd1P70362 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ufd1P70362 Particl-201ENSMUST00000205370 1560 ntBASIC19.34■□□□□ 0.69
Ufd1P70362 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ufd1P70362 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ufd1P70362 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ufd1P70362 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ufd1P70362 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ufd1P70362 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ufd1P70362 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ufd1P70362 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.33■□□□□ 0.68
Ufd1P70362 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ufd1P70362 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ufd1P70362 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ufd1P70362 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ufd1P70362 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ufd1P70362 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ufd1P70362 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ufd1P70362 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ufd1P70362 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ufd1P70362 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.32■□□□□ 0.68
Ufd1P70362 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ufd1P70362 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.32■□□□□ 0.68
Ufd1P70362 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ufd1P70362 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ufd1P70362 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ufd1P70362 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ufd1P70362 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ufd1P70362 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ufd1P70362 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.31■□□□□ 0.68
Ufd1P70362 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ufd1P70362 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ufd1P70362 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ufd1P70362 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ufd1P70362 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ufd1P70362 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ufd1P70362 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.29■□□□□ 0.68
Ufd1P70362 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms