Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Crnkl1P63154 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Crnkl1P63154 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Crnkl1P63154 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Crnkl1P63154 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.34■■□□□ 1.17
Crnkl1P63154 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Crnkl1P63154 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Crnkl1P63154 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Crnkl1P63154 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Crnkl1P63154 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Crnkl1P63154 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Crnkl1P63154 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Crnkl1P63154 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Crnkl1P63154 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Crnkl1P63154 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Crnkl1P63154 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Crnkl1P63154 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Crnkl1P63154 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Crnkl1P63154 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.31■■□□□ 1.16
Crnkl1P63154 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Crnkl1P63154 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Crnkl1P63154 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.3■■□□□ 1.16
Crnkl1P63154 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.3■■□□□ 1.16
Crnkl1P63154 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.3■■□□□ 1.16
Crnkl1P63154 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Crnkl1P63154 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Crnkl1P63154 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Crnkl1P63154 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Crnkl1P63154 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Crnkl1P63154 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Crnkl1P63154 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Crnkl1P63154 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Crnkl1P63154 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Crnkl1P63154 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.28■■□□□ 1.16
Crnkl1P63154 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Crnkl1P63154 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Crnkl1P63154 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Crnkl1P63154 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Crnkl1P63154 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Crnkl1P63154 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.26■■□□□ 1.15
Crnkl1P63154 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crnkl1P63154 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crnkl1P63154 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Crnkl1P63154 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crnkl1P63154 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Crnkl1P63154 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Crnkl1P63154 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Crnkl1P63154 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Crnkl1P63154 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Crnkl1P63154 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Crnkl1P63154 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Crnkl1P63154 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Crnkl1P63154 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Crnkl1P63154 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Crnkl1P63154 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Crnkl1P63154 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Crnkl1P63154 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.24■■□□□ 1.15
Crnkl1P63154 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.24■■□□□ 1.15
Crnkl1P63154 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Crnkl1P63154 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.24■■□□□ 1.15
Crnkl1P63154 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Crnkl1P63154 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.23■■□□□ 1.15
Crnkl1P63154 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Crnkl1P63154 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Crnkl1P63154 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Crnkl1P63154 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Crnkl1P63154 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Crnkl1P63154 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Crnkl1P63154 Dmtn-209ENSMUST00000228295 2572 ntBASIC22.23■■□□□ 1.15
Crnkl1P63154 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crnkl1P63154 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Crnkl1P63154 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crnkl1P63154 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.22■■□□□ 1.15
Crnkl1P63154 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Crnkl1P63154 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crnkl1P63154 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Crnkl1P63154 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Crnkl1P63154 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Crnkl1P63154 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Crnkl1P63154 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
Crnkl1P63154 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Crnkl1P63154 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Crnkl1P63154 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Crnkl1P63154 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Crnkl1P63154 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Crnkl1P63154 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Crnkl1P63154 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Crnkl1P63154 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Crnkl1P63154 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crnkl1P63154 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crnkl1P63154 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.19■■□□□ 1.14
Crnkl1P63154 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Crnkl1P63154 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crnkl1P63154 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Crnkl1P63154 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Crnkl1P63154 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Crnkl1P63154 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Crnkl1P63154 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Crnkl1P63154 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Crnkl1P63154 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms