Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm6P62313 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm6P62313 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm6P62313 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm6P62313 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lsm6P62313 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm6P62313 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm6P62313 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lsm6P62313 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm6P62313 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm6P62313 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm6P62313 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm6P62313 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm6P62313 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lsm6P62313 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm6P62313 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lsm6P62313 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lsm6P62313 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lsm6P62313 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm6P62313 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm6P62313 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Lsm6P62313 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lsm6P62313 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Lsm6P62313 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm6P62313 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm6P62313 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm6P62313 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm6P62313 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm6P62313 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm6P62313 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm6P62313 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm6P62313 Mir3960-201ENSMUST00000198213 73 ntBASIC19.84■□□□□ 0.77
Lsm6P62313 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.84■□□□□ 0.77
Lsm6P62313 Gm9812-201ENSMUST00000061934 968 ntBASIC19.84■□□□□ 0.77
Lsm6P62313 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm6P62313 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm6P62313 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm6P62313 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
Lsm6P62313 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm6P62313 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm6P62313 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm6P62313 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm6P62313 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm6P62313 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.83■□□□□ 0.76
Lsm6P62313 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.82■□□□□ 0.76
Lsm6P62313 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm6P62313 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm6P62313 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm6P62313 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm6P62313 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.82■□□□□ 0.76
Lsm6P62313 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm6P62313 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm6P62313 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lsm6P62313 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Lsm6P62313 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lsm6P62313 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm6P62313 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Lsm6P62313 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Lsm6P62313 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.8■□□□□ 0.76
Lsm6P62313 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm6P62313 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm6P62313 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm6P62313 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm6P62313 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm6P62313 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm6P62313 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm6P62313 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm6P62313 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Lsm6P62313 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Lsm6P62313 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Lsm6P62313 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm6P62313 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.78■□□□□ 0.76
Lsm6P62313 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm6P62313 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.78■□□□□ 0.76
Lsm6P62313 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Lsm6P62313 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm6P62313 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm6P62313 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lsm6P62313 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lsm6P62313 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Lsm6P62313 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.76■□□□□ 0.75
Lsm6P62313 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm6P62313 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm6P62313 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm6P62313 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Lsm6P62313 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.76■□□□□ 0.75
Lsm6P62313 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm6P62313 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lsm6P62313 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm6P62313 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm6P62313 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.75■□□□□ 0.75
Lsm6P62313 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lsm6P62313 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.75■□□□□ 0.75
Lsm6P62313 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm6P62313 Gm45364-201ENSMUST00000210883 159 ntBASIC19.74■□□□□ 0.75
Lsm6P62313 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm6P62313 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm6P62313 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lsm6P62313 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.74■□□□□ 0.75
Lsm6P62313 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms