Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cks2P56390 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cks2P56390 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cks2P56390 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cks2P56390 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cks2P56390 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cks2P56390 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cks2P56390 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cks2P56390 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cks2P56390 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cks2P56390 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks2P56390 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks2P56390 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks2P56390 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks2P56390 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.87■□□□□ 0.61
Cks2P56390 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks2P56390 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks2P56390 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cks2P56390 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks2P56390 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks2P56390 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cks2P56390 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.86■□□□□ 0.61
Cks2P56390 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks2P56390 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks2P56390 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks2P56390 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cks2P56390 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks2P56390 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Cks2P56390 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks2P56390 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks2P56390 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cks2P56390 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
Cks2P56390 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cks2P56390 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cks2P56390 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cks2P56390 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cks2P56390 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cks2P56390 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cks2P56390 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cks2P56390 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cks2P56390 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cks2P56390 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cks2P56390 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Cks2P56390 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cks2P56390 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cks2P56390 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cks2P56390 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.82■□□□□ 0.6
Cks2P56390 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cks2P56390 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cks2P56390 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cks2P56390 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cks2P56390 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cks2P56390 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cks2P56390 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cks2P56390 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cks2P56390 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cks2P56390 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Cks2P56390 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cks2P56390 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cks2P56390 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cks2P56390 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cks2P56390 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cks2P56390 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cks2P56390 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.79■□□□□ 0.6
Cks2P56390 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.79■□□□□ 0.6
Cks2P56390 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Cks2P56390 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cks2P56390 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cks2P56390 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cks2P56390 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.78■□□□□ 0.6
Cks2P56390 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cks2P56390 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cks2P56390 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cks2P56390 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Cks2P56390 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Cks2P56390 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cks2P56390 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cks2P56390 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cks2P56390 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.76■□□□□ 0.59
Cks2P56390 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cks2P56390 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cks2P56390 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cks2P56390 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
Cks2P56390 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.75■□□□□ 0.59
Cks2P56390 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cks2P56390 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cks2P56390 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cks2P56390 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cks2P56390 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.73■□□□□ 0.59
Cks2P56390 Nkain2-201ENSMUST00000092602 558 ntBASIC18.73■□□□□ 0.59
Cks2P56390 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Cks2P56390 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cks2P56390 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cks2P56390 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cks2P56390 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cks2P56390 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.72■□□□□ 0.59
Cks2P56390 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cks2P56390 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cks2P56390 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cks2P56390 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 159.2 ms