Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Sox1P53783 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sox1P53783 Terc-201ENSMUST00000082862 423 ntBASIC23.95■■□□□ 1.42
Sox1P53783 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.94■■□□□ 1.42
Sox1P53783 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sox1P53783 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.94■■□□□ 1.42
Sox1P53783 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sox1P53783 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.93■■□□□ 1.42
Sox1P53783 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.93■■□□□ 1.42
Sox1P53783 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Sox1P53783 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Sox1P53783 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sox1P53783 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Sox1P53783 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Sox1P53783 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.9■■□□□ 1.42
Sox1P53783 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Sox1P53783 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Sox1P53783 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Sox1P53783 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.88■■□□□ 1.41
Sox1P53783 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.88■■□□□ 1.41
Sox1P53783 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Sox1P53783 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Sox1P53783 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.87■■□□□ 1.41
Sox1P53783 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.87■■□□□ 1.41
Sox1P53783 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
Sox1P53783 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.86■■□□□ 1.41
Sox1P53783 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Sox1P53783 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sox1P53783 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sox1P53783 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Sox1P53783 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox1P53783 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox1P53783 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.84■■□□□ 1.41
Sox1P53783 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.84■■□□□ 1.41
Sox1P53783 Gm13241-201ENSMUST00000094493 780 ntBASIC23.84■■□□□ 1.41
Sox1P53783 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Sox1P53783 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sox1P53783 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sox1P53783 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Sox1P53783 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sox1P53783 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.82■■□□□ 1.4
Sox1P53783 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Sox1P53783 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Sox1P53783 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Sox1P53783 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.81■■□□□ 1.4
Sox1P53783 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.81■■□□□ 1.4
Sox1P53783 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Sox1P53783 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Sox1P53783 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.8■■□□□ 1.4
Sox1P53783 Gm44428-201ENSMUST00000204474 874 ntBASIC23.8■■□□□ 1.4
Sox1P53783 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.79■■□□□ 1.4
Sox1P53783 Gm21956-201ENSMUST00000179946 522 ntBASIC23.79■■□□□ 1.4
Sox1P53783 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.79■■□□□ 1.4
Sox1P53783 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Sox1P53783 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sox1P53783 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sox1P53783 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Sox1P53783 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.78■■□□□ 1.4
Sox1P53783 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Sox1P53783 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Sox1P53783 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Sox1P53783 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sox1P53783 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Sox1P53783 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Sox1P53783 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox1P53783 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.75■■□□□ 1.39
Sox1P53783 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Sox1P53783 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.74■■□□□ 1.39
Sox1P53783 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.74■■□□□ 1.39
Sox1P53783 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.74■■□□□ 1.39
Sox1P53783 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Sox1P53783 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Sox1P53783 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox1P53783 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Sox1P53783 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Sox1P53783 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Sox1P53783 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Sox1P53783 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.72■■□□□ 1.39
Sox1P53783 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.72■■□□□ 1.39
Sox1P53783 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Sox1P53783 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Sox1P53783 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Sox1P53783 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Sox1P53783 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Sox1P53783 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Sox1P53783 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.7■■□□□ 1.38
Sox1P53783 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Sox1P53783 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox1P53783 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Sox1P53783 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox1P53783 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Sox1P53783 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sox1P53783 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.68■■□□□ 1.38
Sox1P53783 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sox1P53783 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.68■■□□□ 1.38
Sox1P53783 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.68■■□□□ 1.38
Sox1P53783 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Sox1P53783 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Sox1P53783 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Sox1P53783 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms