Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp9P41245 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Mmp9P41245 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp9P41245 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp9P41245 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp9P41245 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp9P41245 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Mmp9P41245 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp9P41245 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Mmp9P41245 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Mmp9P41245 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp9P41245 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mmp9P41245 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.95■□□□□ 0.62
Mmp9P41245 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Mmp9P41245 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mmp9P41245 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.93■□□□□ 0.62
Mmp9P41245 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp9P41245 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Mmp9P41245 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.92■□□□□ 0.62
Mmp9P41245 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp9P41245 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.92■□□□□ 0.62
Mmp9P41245 Gm9397-201ENSMUST00000200125 605 ntBASIC18.92■□□□□ 0.62
Mmp9P41245 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp9P41245 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp9P41245 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Mmp9P41245 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp9P41245 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp9P41245 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Mmp9P41245 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp9P41245 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mmp9P41245 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Mmp9P41245 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Mmp9P41245 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp9P41245 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp9P41245 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp9P41245 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp9P41245 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mmp9P41245 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Mmp9P41245 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp9P41245 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp9P41245 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp9P41245 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mmp9P41245 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp9P41245 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp9P41245 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp9P41245 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp9P41245 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.88■□□□□ 0.61
Mmp9P41245 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.88■□□□□ 0.61
Mmp9P41245 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mmp9P41245 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Mmp9P41245 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp9P41245 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp9P41245 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp9P41245 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp9P41245 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Mmp9P41245 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.86■□□□□ 0.61
Mmp9P41245 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Mmp9P41245 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp9P41245 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Mmp9P41245 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.85■□□□□ 0.61
Mmp9P41245 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.85■□□□□ 0.61
Mmp9P41245 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Mmp9P41245 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Mmp9P41245 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp9P41245 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp9P41245 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Mmp9P41245 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Mmp9P41245 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp9P41245 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Mmp9P41245 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.83■□□□□ 0.6
Mmp9P41245 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Mmp9P41245 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp9P41245 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.83■□□□□ 0.6
Mmp9P41245 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.83■□□□□ 0.6
Mmp9P41245 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Mmp9P41245 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp9P41245 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp9P41245 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Mmp9P41245 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.82■□□□□ 0.6
Mmp9P41245 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp9P41245 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp9P41245 Particl-201ENSMUST00000205370 1560 ntBASIC18.81■□□□□ 0.6
Mmp9P41245 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp9P41245 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp9P41245 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp9P41245 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp9P41245 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp9P41245 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms