Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TP20293 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TP20293 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TP20293 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TP20293 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TP20293 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
TP20293 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.17■□□□□ 0.98
TP20293 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TP20293 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.17■□□□□ 0.98
TP20293 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.17■□□□□ 0.98
TP20293 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.17■□□□□ 0.98
TP20293 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TP20293 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TP20293 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TP20293 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TP20293 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TP20293 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TP20293 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.16■□□□□ 0.98
TP20293 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.16■□□□□ 0.98
TP20293 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TP20293 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TP20293 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
TP20293 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TP20293 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
TP20293 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TP20293 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TP20293 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TP20293 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TP20293 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.13■□□□□ 0.97
TP20293 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.13■□□□□ 0.97
TP20293 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
TP20293 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TP20293 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TP20293 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.12■□□□□ 0.97
TP20293 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TP20293 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TP20293 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TP20293 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TP20293 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TP20293 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TP20293 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TP20293 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TP20293 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.11■□□□□ 0.97
TP20293 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.11■□□□□ 0.97
TP20293 Mir3960-201ENSMUST00000198213 73 ntBASIC21.11■□□□□ 0.97
TP20293 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TP20293 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.11■□□□□ 0.97
TP20293 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.11■□□□□ 0.97
TP20293 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TP20293 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TP20293 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TP20293 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TP20293 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TP20293 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
TP20293 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TP20293 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TP20293 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TP20293 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TP20293 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TP20293 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TP20293 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
TP20293 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.07■□□□□ 0.96
TP20293 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TP20293 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.07■□□□□ 0.96
TP20293 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TP20293 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TP20293 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.06■□□□□ 0.96
TP20293 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TP20293 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.06■□□□□ 0.96
TP20293 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.05■□□□□ 0.96
TP20293 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TP20293 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TP20293 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TP20293 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TP20293 Gm9812-201ENSMUST00000061934 968 ntBASIC21.05■□□□□ 0.96
TP20293 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TP20293 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TP20293 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TP20293 Gm45364-201ENSMUST00000210883 159 ntBASIC21.04■□□□□ 0.96
TP20293 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TP20293 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TP20293 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.03■□□□□ 0.96
TP20293 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TP20293 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TP20293 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TP20293 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TP20293 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TP20293 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.02■□□□□ 0.96
TP20293 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TP20293 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TP20293 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.02■□□□□ 0.95
TP20293 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TP20293 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TP20293 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
TP20293 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TP20293 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21■□□□□ 0.95
TP20293 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TP20293 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TP20293 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TP20293 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms