Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfb1P04202 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfb1P04202 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfb1P04202 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfb1P04202 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Tgfb1P04202 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Tgfb1P04202 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tgfb1P04202 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfb1P04202 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfb1P04202 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfb1P04202 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfb1P04202 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfb1P04202 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfb1P04202 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tgfb1P04202 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tgfb1P04202 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tgfb1P04202 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tgfb1P04202 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tgfb1P04202 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tgfb1P04202 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tgfb1P04202 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Tgfb1P04202 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tgfb1P04202 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tgfb1P04202 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tgfb1P04202 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfb1P04202 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.02■□□□□ 0.96
Tgfb1P04202 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfb1P04202 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tgfb1P04202 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tgfb1P04202 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Tgfb1P04202 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tgfb1P04202 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tgfb1P04202 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tgfb1P04202 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tgfb1P04202 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tgfb1P04202 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21■□□□□ 0.95
Tgfb1P04202 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tgfb1P04202 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tgfb1P04202 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tgfb1P04202 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tgfb1P04202 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tgfb1P04202 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tgfb1P04202 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tgfb1P04202 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tgfb1P04202 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfb1P04202 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfb1P04202 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfb1P04202 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tgfb1P04202 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfb1P04202 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfb1P04202 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tgfb1P04202 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tgfb1P04202 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tgfb1P04202 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tgfb1P04202 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tgfb1P04202 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.95■□□□□ 0.94
Tgfb1P04202 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tgfb1P04202 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Tgfb1P04202 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tgfb1P04202 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.95■□□□□ 0.94
Tgfb1P04202 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.94■□□□□ 0.94
Tgfb1P04202 Gm7432-201ENSMUST00000210343 879 ntBASIC20.94■□□□□ 0.94
Tgfb1P04202 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tgfb1P04202 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tgfb1P04202 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.94■□□□□ 0.94
Tgfb1P04202 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tgfb1P04202 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tgfb1P04202 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.93■□□□□ 0.94
Tgfb1P04202 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfb1P04202 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tgfb1P04202 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.92■□□□□ 0.94
Tgfb1P04202 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.92■□□□□ 0.94
Tgfb1P04202 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tgfb1P04202 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tgfb1P04202 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tgfb1P04202 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tgfb1P04202 Gm4799-201ENSMUST00000095396 657 ntBASIC20.9■□□□□ 0.94
Tgfb1P04202 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tgfb1P04202 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Tgfb1P04202 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tgfb1P04202 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tgfb1P04202 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Tgfb1P04202 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfb1P04202 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.89■□□□□ 0.93
Tgfb1P04202 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tgfb1P04202 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfb1P04202 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tgfb1P04202 Gm11599-201ENSMUST00000118720 878 ntBASIC20.88■□□□□ 0.93
Tgfb1P04202 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.88■□□□□ 0.93
Tgfb1P04202 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tgfb1P04202 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tgfb1P04202 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tgfb1P04202 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tgfb1P04202 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Tgfb1P04202 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Tgfb1P04202 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tgfb1P04202 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tgfb1P04202 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
Tgfb1P04202 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tgfb1P04202 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms