Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxa3P02831 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxa3P02831 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxa3P02831 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxa3P02831 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hoxa3P02831 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxa3P02831 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxa3P02831 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.93■□□□□ 0.62
Hoxa3P02831 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxa3P02831 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.93■□□□□ 0.62
Hoxa3P02831 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxa3P02831 Gm27502-201ENSMUST00000183495 199 ntBASIC18.93■□□□□ 0.62
Hoxa3P02831 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hoxa3P02831 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.93■□□□□ 0.62
Hoxa3P02831 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Hoxa3P02831 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxa3P02831 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxa3P02831 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxa3P02831 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.92■□□□□ 0.62
Hoxa3P02831 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxa3P02831 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxa3P02831 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Hoxa3P02831 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hoxa3P02831 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hoxa3P02831 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hoxa3P02831 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hoxa3P02831 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxa3P02831 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxa3P02831 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxa3P02831 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxa3P02831 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.9■□□□□ 0.62
Hoxa3P02831 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hoxa3P02831 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Hoxa3P02831 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxa3P02831 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hoxa3P02831 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxa3P02831 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxa3P02831 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxa3P02831 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hoxa3P02831 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa3P02831 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa3P02831 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa3P02831 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Hoxa3P02831 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.88■□□□□ 0.61
Hoxa3P02831 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa3P02831 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Hoxa3P02831 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa3P02831 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Hoxa3P02831 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa3P02831 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa3P02831 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hoxa3P02831 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Hoxa3P02831 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa3P02831 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa3P02831 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa3P02831 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hoxa3P02831 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa3P02831 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa3P02831 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.85■□□□□ 0.61
Hoxa3P02831 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa3P02831 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa3P02831 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa3P02831 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hoxa3P02831 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Hoxa3P02831 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Hoxa3P02831 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa3P02831 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa3P02831 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa3P02831 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.84■□□□□ 0.61
Hoxa3P02831 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Hoxa3P02831 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hoxa3P02831 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa3P02831 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa3P02831 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Hoxa3P02831 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Hoxa3P02831 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxa3P02831 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hoxa3P02831 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.83■□□□□ 0.6
Hoxa3P02831 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.83■□□□□ 0.6
Hoxa3P02831 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.83■□□□□ 0.6
Hoxa3P02831 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Hoxa3P02831 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.82■□□□□ 0.6
Hoxa3P02831 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.82■□□□□ 0.6
Hoxa3P02831 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa3P02831 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa3P02831 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa3P02831 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hoxa3P02831 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Hoxa3P02831 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa3P02831 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Hoxa3P02831 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.81■□□□□ 0.6
Hoxa3P02831 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa3P02831 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa3P02831 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hoxa3P02831 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa3P02831 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Hoxa3P02831 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hoxa3P02831 Terc-201ENSMUST00000082862 423 ntBASIC18.8■□□□□ 0.6
Hoxa3P02831 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.8■□□□□ 0.6
Hoxa3P02831 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms