Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01852 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P01852 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
P01852 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P01852 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.67■□□□□ 0.9
P01852 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P01852 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01852 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.67■□□□□ 0.9
P01852 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P01852 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P01852 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P01852 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P01852 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01852 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P01852 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.66■□□□□ 0.9
P01852 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
P01852 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
P01852 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01852 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P01852 Gm11175-201ENSMUST00000116172 543 ntBASIC20.65■□□□□ 0.9
P01852 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
P01852 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P01852 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P01852 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
P01852 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.63■□□□□ 0.89
P01852 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P01852 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01852 Scarna2-201ENSMUST00000157560 414 ntBASIC20.62■□□□□ 0.89
P01852 Mir6538-201ENSMUST00000183713 110 ntBASIC20.62■□□□□ 0.89
P01852 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.62■□□□□ 0.89
P01852 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01852 Gm9806-201ENSMUST00000051080 552 ntBASIC20.62■□□□□ 0.89
P01852 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P01852 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01852 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P01852 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01852 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P01852 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01852 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P01852 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
P01852 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01852 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P01852 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
P01852 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.59■□□□□ 0.89
P01852 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01852 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01852 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P01852 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P01852 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01852 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01852 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
P01852 Gm11687-201ENSMUST00000118911 886 ntBASIC20.58■□□□□ 0.89
P01852 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
P01852 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
P01852 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
P01852 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
P01852 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
P01852 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01852 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
P01852 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01852 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
P01852 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
P01852 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01852 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
P01852 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
P01852 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
P01852 Gm16437-201ENSMUST00000025669 507 ntBASIC20.54■□□□□ 0.88
P01852 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01852 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P01852 Terc-201ENSMUST00000082862 423 ntBASIC20.54■□□□□ 0.88
P01852 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P01852 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01852 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
P01852 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
P01852 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01852 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01852 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01852 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P01852 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
P01852 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
P01852 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
P01852 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.53■□□□□ 0.88
P01852 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.52■□□□□ 0.88
P01852 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
P01852 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01852 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
P01852 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
P01852 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
P01852 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.52■□□□□ 0.87
P01852 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
P01852 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01852 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.51■□□□□ 0.87
P01852 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01852 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
P01852 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
P01852 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.5■□□□□ 0.87
P01852 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.5■□□□□ 0.87
P01852 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
P01852 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
P01852 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms