Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC31.6■■■□□ 2.65
Tom1O88746 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Tom1O88746 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC31.59■■■□□ 2.65
Tom1O88746 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Tom1O88746 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Tom1O88746 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Tom1O88746 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.59■■■□□ 2.65
Tom1O88746 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Tom1O88746 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC31.58■■■□□ 2.65
Tom1O88746 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Tom1O88746 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Tom1O88746 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.57■■■□□ 2.64
Tom1O88746 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC31.57■■■□□ 2.64
Tom1O88746 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
Tom1O88746 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Tom1O88746 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tom1O88746 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Tom1O88746 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Tom1O88746 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Tom1O88746 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tom1O88746 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Tom1O88746 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC31.54■■■□□ 2.64
Tom1O88746 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tom1O88746 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Tom1O88746 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Tom1O88746 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Tom1O88746 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Tom1O88746 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
Tom1O88746 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Tom1O88746 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC31.5■■■□□ 2.63
Tom1O88746 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC31.5■■■□□ 2.63
Tom1O88746 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC31.5■■■□□ 2.63
Tom1O88746 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC31.48■■■□□ 2.63
Tom1O88746 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tom1O88746 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Tom1O88746 Gm13241-201ENSMUST00000094493 780 ntBASIC31.47■■■□□ 2.63
Tom1O88746 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tom1O88746 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC31.46■■■□□ 2.63
Tom1O88746 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tom1O88746 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tom1O88746 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Tom1O88746 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Tom1O88746 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC31.45■■■□□ 2.63
Tom1O88746 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Tom1O88746 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tom1O88746 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Tom1O88746 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
Tom1O88746 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tom1O88746 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tom1O88746 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.43■■■□□ 2.62
Tom1O88746 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Tom1O88746 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
Tom1O88746 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Tom1O88746 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tom1O88746 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC31.41■■■□□ 2.62
Tom1O88746 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC31.41■■■□□ 2.62
Tom1O88746 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Tom1O88746 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Tom1O88746 Gm43034-201ENSMUST00000198678 1364 ntBASIC31.41■■■□□ 2.62
Tom1O88746 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Tom1O88746 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Tom1O88746 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Tom1O88746 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.39■■■□□ 2.62
Tom1O88746 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC31.39■■■□□ 2.62
Tom1O88746 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC31.39■■■□□ 2.62
Tom1O88746 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Tom1O88746 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.39■■■□□ 2.62
Tom1O88746 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
Tom1O88746 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tom1O88746 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tom1O88746 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Tom1O88746 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tom1O88746 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tom1O88746 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Tom1O88746 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tom1O88746 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tom1O88746 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Tom1O88746 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Tom1O88746 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
Tom1O88746 Gm10232-201ENSMUST00000089221 720 ntBASIC31.34■■■□□ 2.61
Tom1O88746 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Tom1O88746 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tom1O88746 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Tom1O88746 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Tom1O88746 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Tom1O88746 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Tom1O88746 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC31.32■■■□□ 2.6
Tom1O88746 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Tom1O88746 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
Tom1O88746 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Tom1O88746 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tom1O88746 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Tom1O88746 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Tom1O88746 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC31.27■■■□□ 2.6
Tom1O88746 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Tom1O88746 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC31.26■■■□□ 2.59
Tom1O88746 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC31.26■■■□□ 2.59
Tom1O88746 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC31.26■■■□□ 2.59
Tom1O88746 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Tom1O88746 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms