Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.86■□□□□ 0.93
Capns1O88456 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Capns1O88456 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.85■□□□□ 0.93
Capns1O88456 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Capns1O88456 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Capns1O88456 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Capns1O88456 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Capns1O88456 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Capns1O88456 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Capns1O88456 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Capns1O88456 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Capns1O88456 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Capns1O88456 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Capns1O88456 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Capns1O88456 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Capns1O88456 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Capns1O88456 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Capns1O88456 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Capns1O88456 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Capns1O88456 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Capns1O88456 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Capns1O88456 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Capns1O88456 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Capns1O88456 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Capns1O88456 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Capns1O88456 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Capns1O88456 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Capns1O88456 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.8■□□□□ 0.92
Capns1O88456 Particl-201ENSMUST00000205370 1560 ntBASIC20.8■□□□□ 0.92
Capns1O88456 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Capns1O88456 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Capns1O88456 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Capns1O88456 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Capns1O88456 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Capns1O88456 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Capns1O88456 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Capns1O88456 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Capns1O88456 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Capns1O88456 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.77■□□□□ 0.92
Capns1O88456 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Capns1O88456 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.77■□□□□ 0.92
Capns1O88456 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Capns1O88456 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Capns1O88456 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.76■□□□□ 0.91
Capns1O88456 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Capns1O88456 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Capns1O88456 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capns1O88456 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Capns1O88456 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capns1O88456 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.75■□□□□ 0.91
Capns1O88456 Gm30023-201ENSMUST00000197970 889 ntBASIC20.75■□□□□ 0.91
Capns1O88456 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capns1O88456 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capns1O88456 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Capns1O88456 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capns1O88456 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Capns1O88456 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capns1O88456 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.74■□□□□ 0.91
Capns1O88456 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capns1O88456 Gm7432-201ENSMUST00000210343 879 ntBASIC20.74■□□□□ 0.91
Capns1O88456 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capns1O88456 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Capns1O88456 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capns1O88456 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Capns1O88456 Nkain2-201ENSMUST00000092602 558 ntBASIC20.73■□□□□ 0.91
Capns1O88456 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Capns1O88456 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Capns1O88456 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.72■□□□□ 0.91
Capns1O88456 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Capns1O88456 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.71■□□□□ 0.91
Capns1O88456 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Capns1O88456 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Capns1O88456 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Capns1O88456 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Capns1O88456 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.7■□□□□ 0.9
Capns1O88456 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Capns1O88456 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Capns1O88456 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.69■□□□□ 0.9
Capns1O88456 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Capns1O88456 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Capns1O88456 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Capns1O88456 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capns1O88456 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Capns1O88456 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capns1O88456 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Capns1O88456 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Capns1O88456 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.68■□□□□ 0.9
Capns1O88456 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Capns1O88456 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capns1O88456 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capns1O88456 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms