Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cacna1hO88427 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.07■■□□□ 1.28
Cacna1hO88427 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Cacna1hO88427 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cacna1hO88427 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.07■■□□□ 1.28
Cacna1hO88427 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
Cacna1hO88427 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Cacna1hO88427 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacna1hO88427 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacna1hO88427 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cacna1hO88427 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cacna1hO88427 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.05■■□□□ 1.28
Cacna1hO88427 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cacna1hO88427 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cacna1hO88427 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Cacna1hO88427 Gm21956-201ENSMUST00000179946 522 ntBASIC23.03■■□□□ 1.28
Cacna1hO88427 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cacna1hO88427 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
Cacna1hO88427 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.02■■□□□ 1.28
Cacna1hO88427 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cacna1hO88427 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.02■■□□□ 1.27
Cacna1hO88427 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cacna1hO88427 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cacna1hO88427 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.01■■□□□ 1.27
Cacna1hO88427 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cacna1hO88427 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cacna1hO88427 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cacna1hO88427 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23■■□□□ 1.27
Cacna1hO88427 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23■■□□□ 1.27
Cacna1hO88427 Terc-201ENSMUST00000082862 423 ntBASIC22.99■■□□□ 1.27
Cacna1hO88427 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cacna1hO88427 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cacna1hO88427 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cacna1hO88427 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.99■■□□□ 1.27
Cacna1hO88427 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Cacna1hO88427 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cacna1hO88427 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Cacna1hO88427 Gm10232-201ENSMUST00000089221 720 ntBASIC22.98■■□□□ 1.27
Cacna1hO88427 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.98■■□□□ 1.27
Cacna1hO88427 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cacna1hO88427 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Cacna1hO88427 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cacna1hO88427 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.96■■□□□ 1.27
Cacna1hO88427 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cacna1hO88427 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cacna1hO88427 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cacna1hO88427 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.96■■□□□ 1.27
Cacna1hO88427 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cacna1hO88427 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.27
Cacna1hO88427 Etf1-202ENSMUST00000180351 108 ntBASIC22.95■■□□□ 1.26
Cacna1hO88427 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cacna1hO88427 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Cacna1hO88427 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.94■■□□□ 1.26
Cacna1hO88427 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cacna1hO88427 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Cacna1hO88427 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.92■■□□□ 1.26
Cacna1hO88427 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.92■■□□□ 1.26
Cacna1hO88427 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cacna1hO88427 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Cacna1hO88427 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.92■■□□□ 1.26
Cacna1hO88427 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cacna1hO88427 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.91■■□□□ 1.26
Cacna1hO88427 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cacna1hO88427 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cacna1hO88427 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cacna1hO88427 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cacna1hO88427 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Cacna1hO88427 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Cacna1hO88427 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.9■■□□□ 1.26
Cacna1hO88427 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.89■■□□□ 1.26
Cacna1hO88427 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Cacna1hO88427 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cacna1hO88427 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cacna1hO88427 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Cacna1hO88427 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cacna1hO88427 Gm44428-201ENSMUST00000204474 874 ntBASIC22.87■■□□□ 1.25
Cacna1hO88427 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cacna1hO88427 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cacna1hO88427 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cacna1hO88427 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cacna1hO88427 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
Cacna1hO88427 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cacna1hO88427 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cacna1hO88427 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.86■■□□□ 1.25
Cacna1hO88427 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cacna1hO88427 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cacna1hO88427 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cacna1hO88427 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC22.85■■□□□ 1.25
Cacna1hO88427 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cacna1hO88427 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cacna1hO88427 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cacna1hO88427 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.84■■□□□ 1.25
Cacna1hO88427 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cacna1hO88427 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Cacna1hO88427 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cacna1hO88427 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.83■■□□□ 1.25
Cacna1hO88427 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cacna1hO88427 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Cacna1hO88427 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cacna1hO88427 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms