Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pdlim3O70209 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pdlim3O70209 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim3O70209 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim3O70209 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim3O70209 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim3O70209 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pdlim3O70209 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Pdlim3O70209 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim3O70209 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pdlim3O70209 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Pdlim3O70209 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim3O70209 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdlim3O70209 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.53■□□□□ 0.88
Pdlim3O70209 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim3O70209 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Pdlim3O70209 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim3O70209 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim3O70209 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdlim3O70209 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim3O70209 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.52■□□□□ 0.88
Pdlim3O70209 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim3O70209 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim3O70209 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim3O70209 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim3O70209 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pdlim3O70209 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pdlim3O70209 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdlim3O70209 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdlim3O70209 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdlim3O70209 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.51■□□□□ 0.87
Pdlim3O70209 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim3O70209 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pdlim3O70209 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim3O70209 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Pdlim3O70209 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim3O70209 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim3O70209 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim3O70209 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim3O70209 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdlim3O70209 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim3O70209 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim3O70209 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.49■□□□□ 0.87
Pdlim3O70209 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pdlim3O70209 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim3O70209 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.49■□□□□ 0.87
Pdlim3O70209 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.49■□□□□ 0.87
Pdlim3O70209 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pdlim3O70209 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim3O70209 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim3O70209 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim3O70209 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdlim3O70209 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pdlim3O70209 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim3O70209 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim3O70209 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim3O70209 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim3O70209 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pdlim3O70209 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdlim3O70209 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Pdlim3O70209 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim3O70209 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
Pdlim3O70209 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim3O70209 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pdlim3O70209 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim3O70209 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdlim3O70209 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pdlim3O70209 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.46■□□□□ 0.87
Pdlim3O70209 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdlim3O70209 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pdlim3O70209 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim3O70209 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim3O70209 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim3O70209 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdlim3O70209 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Pdlim3O70209 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim3O70209 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim3O70209 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim3O70209 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim3O70209 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.44■□□□□ 0.86
Pdlim3O70209 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdlim3O70209 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim3O70209 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdlim3O70209 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim3O70209 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim3O70209 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim3O70209 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim3O70209 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim3O70209 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pdlim3O70209 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim3O70209 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim3O70209 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim3O70209 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim3O70209 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pdlim3O70209 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim3O70209 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim3O70209 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim3O70209 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim3O70209 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pdlim3O70209 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms